Gene Cphy_0904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0904 
Symbol 
ID5741776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1155089 
End bp1156636 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content42% 
IMG OID641292016 
Productcarbohydrate kinase, YjeF related protein 
Protein accessionYP_001558028 
Protein GI160879060 
COG category[G] Carbohydrate transport and metabolism
[S] Function unknown 
COG ID[COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGTATG CACTAGATGC GGTGCAAATG AAAAACTTAG ATAAGAAAAC AATCGAGCAG 
ATTGGAATTC CAGCAATGGT TCTCATGGAG CGTGCAGCAC TTTATGTGGC GGAACAAGTC
AGAGAACATG CAAAACCGAC CGATAAGATC ATCGCGGTTT GCGGAACCGG CAACAATGGC
GGTGATGGGA TTGCAGCTGC TCGCATTTTG CATTTATGGG GGTATCACGT AACCATCGGA
ATCATCGGTG AAATGGAAAA GTTTTCGAAA GAATGTAGAG AACAGTGGAA GATTGCGAAA
AATTTAGGGT TATCCATCCG TACCGAATGG GAAATAACAG AATATAATAT AGTAATTGAC
GGTATCTTTG GTATAGGCCT TGGCAAACCG GTGAGTGGTG AATATGCGAA GGTGATCCAA
AGTATTAATC AAAGTGACTG TTATGTGGTT TCGATTGATA TACCGTCTGG TATTAGTGCA
AGTAATGGGC AAGTCTTTGG TTGTGCAGTA AAAGCAAACG AAACGGTTAC TTTTGGTGAA
CAAAAACTTG GACTATTGCT TTACCCAGGG GCAACTTATG CTGGAAAGAT TCATATCGCG
GATATCGGAT TTGCAAAGGA AAAACTGGAC AGTCTTACCT ACACTTACTA CGAAACTACT
GATTTAGATA AACTACCAAT CAGAATGCCA TATTCCAATA AAGGGAGCTA TGGAAGAGTA
CTCGTGATTG CAGGAACAGA AAGCATGACT GGTGCAGCTT ATTTTAGTGC GGCAGCAGCA
TATCGTATGG GAGCGGGTTT AGTAAAGATC CTTTCAGCGA AGAAGGCAAT TCCTGTGCTT
CAGGGAATGC TTCCGGAAGC TTTGTTTGCA GCCTATGATG AGGAGGATTA TGAGGAACAG
GTTAACAAAG CATTGGAGTT TGCAACTGTG ATTGTTATAG GACCAGGTCT AGGGGTAGAG
GCTATCGCTA AGAAATTATT GCTTAAAGTA TGTAAAGAAG CGAAAGTGCC TCTTATTGTA
GATGCAGATG GAATTAATTT ACTGGCTATG TTGGCAGATG AAATGATACC TGATGTATTA
CAGCTAACAG ACGAGGTTGA ACGTTTGCAT CAACGAATTT ACTATATAAA GGAAATACTA
CCAGAAGGAA CTATCTTGAC ACCTCATTTA AAGGAGCTTT CTAGGCTTAC TTTATATCCA
CTTAATAAAA TTCCTTGTAA TTTAATTGAC ATAGCCAGCT ATTGTACTTA TAATAACTTA
ATGATTTATG TGTTAAAAGA TAGCAGGACT ATCGTTGCTT CGAAAGACTT GCGTTATATC
AATGTATCCG GTACCCATGG AATGGCGACC GGAGGCAGCG GCGATGCACT CACGGGAATC
ATTGCTGGAT TGATAGCAGG GGGACTTGAA GCAGGAAAGG CAGCAACACT AGGTGTGTAT
CTTCATGGAC TGGCAGGAGA AGAAGCCGCC AAAGTAAAAT CAACCTACTC TATGTTAGCT
GGGGATATGA TCGAAGCGTT GCCGGAGGTT TTAAGAAATC ATGATTGA
 
Protein sequence
MRYALDAVQM KNLDKKTIEQ IGIPAMVLME RAALYVAEQV REHAKPTDKI IAVCGTGNNG 
GDGIAAARIL HLWGYHVTIG IIGEMEKFSK ECREQWKIAK NLGLSIRTEW EITEYNIVID
GIFGIGLGKP VSGEYAKVIQ SINQSDCYVV SIDIPSGISA SNGQVFGCAV KANETVTFGE
QKLGLLLYPG ATYAGKIHIA DIGFAKEKLD SLTYTYYETT DLDKLPIRMP YSNKGSYGRV
LVIAGTESMT GAAYFSAAAA YRMGAGLVKI LSAKKAIPVL QGMLPEALFA AYDEEDYEEQ
VNKALEFATV IVIGPGLGVE AIAKKLLLKV CKEAKVPLIV DADGINLLAM LADEMIPDVL
QLTDEVERLH QRIYYIKEIL PEGTILTPHL KELSRLTLYP LNKIPCNLID IASYCTYNNL
MIYVLKDSRT IVASKDLRYI NVSGTHGMAT GGSGDALTGI IAGLIAGGLE AGKAATLGVY
LHGLAGEEAA KVKSTYSMLA GDMIEALPEV LRNHD