Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0882 |
Symbol | |
ID | 5741754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1132706 |
End bp | 1133635 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641291995 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_001558007 |
Protein GI | 160879039 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000414792 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACAAA AACTCATAAG CAAAATAGAA CAGAACAATG CACCTATCGT TGTAGGTTTA GACCCAATGT TAAGTTATAT CCCAAAGCAT GTTTTAGAGA AAGCATATGC TGAGTTTGGT GAAACACTTG AGGGTGCAGC AGAAGCAATT TGGCAGTTTA ACAAGGCAAT CGTAGATACA ACCTACGACT TAATTCCAGC TGTGAAACCT CAGATTGCTA TGTATGAGCA ATTTGGAATT CCAGGGATGA TTGCATTTAA GAAGACTGTT GATTACTGTA AGGAAAAGGA CCTTGTAGTA ATAGGTGATA TTAAAAGAGG TGATATTGGT TCTACTTCCG CGGCTTATGC TACTGGACAC CTTGGTAAAG TTACAGTAGG CAGCAAATCT TTTTATGGCT TTGATGAGGA TTTTGTAACA GTGAACCCAT ATCTCGGTTC TGATGGAATT ACACCATTTC TTGATGTATG TAAGGAAGAA AACAAAGGTT TATTTATTTT AGTGAAAACC TCAAATCCAT CCAGTGGTGA ATTTCAAGAT CAGCTTATTG ATGGTAAACC ACTCTATGAA TTAGTTGGCA AAAAGGTTGC TGAGTGGGGC GAGATGTGTA TGGGTGAAAA GTATAGTTAT ATCGGTGCTG TTGTCGGAGC AACTTATCCT GAGATGGGAA AGGTTCTTCG TAAATTAATG CCTAAGACAT ATATATTAGT ACCAGGTTAT GGTGCACAAG GTGGAAAAGC TTCTGATCTG GCTCCTTACT TTAATGAGGA TGGCTTAGGA GCAATTATCA ATTCTTCCCG TGGAATAATC GCAGCTTACA AGCAGTCCGC TTATGAAAGT TTTGGTGCTG CAAATTTTGC TGATGCTTCA CGACAGGCGG TAATTGATAT GAGAGAAGAT ATTAACCAGG CATTATCTCA TAAAGAATAG
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Protein sequence | MIQKLISKIE QNNAPIVVGL DPMLSYIPKH VLEKAYAEFG ETLEGAAEAI WQFNKAIVDT TYDLIPAVKP QIAMYEQFGI PGMIAFKKTV DYCKEKDLVV IGDIKRGDIG STSAAYATGH LGKVTVGSKS FYGFDEDFVT VNPYLGSDGI TPFLDVCKEE NKGLFILVKT SNPSSGEFQD QLIDGKPLYE LVGKKVAEWG EMCMGEKYSY IGAVVGATYP EMGKVLRKLM PKTYILVPGY GAQGGKASDL APYFNEDGLG AIINSSRGII AAYKQSAYES FGAANFADAS RQAVIDMRED INQALSHKE
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