| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0876 |
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| Symbol | |
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| ID | 5741748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1125956 |
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| End bp | 1127734 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641291989 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_001558001 |
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| Protein GI | 160879033 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0250964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAA AGTGGATGTT GGAGGCAAAG CGTGCTGATT TTGAAGCATT GGCAAATCGT
CTTGCTATCA GTCCGGTTTT GGCACGTATT ATTGTGAATC GTGGTCTTTC TGAAGAAGAC
GAAATGCAAC GTTATCTATC TTGCGATTTA ACTGAGATGT ATTCAGGGCT TATGATGAAG
GGAATGGAAC AAGCGCGCAA CCTTATTATA ACAGCAGTTG AAGAAAATCA ATTAATTGCT
ATAGGTACGG ATTTTGATAA TGATGGAATC TTATCTGGAC ATAGTTTGTC AACTGCCTTG
AAAAGGATTG GAGGGAGAGT AGTTGTCTAT GCACCTGATC GAATTTCTGA AGGATATGGC
TTAAATAGAC GTATCGTTTT GGAGGCGTAT GAAGCAGGTA GTCGCTTGAT TATAACTTGT
GATAACGGGA TTGCAGTTTT TGATGCAATT GATTATGCCA AGGAACTAGG AATGACGGTC
GTGGTAACTG ATCATCATGA AGTTGCTTTT GAAGAGGATG AGAATGGTAG TAGAACATTT
TTACTTCCGA ATGCCGACGT TGTGGTAAAT CCGAAGCAAG AGGGTTGTCC TTATCCTTTT
AAGGGGTTGT GTGGCGCTGG TGTCGTATAT AAGTTAATTG AGTTACTGTA TGAGTATTAC
AGCGTACCAA AAGAGGAACT TTATGATTTA TTAGAGTTTA TTGCTATAGC AACCGTTGCT
GACGTTATGG ATTTGGTTTC AGAAAATCGA CTGATAGTAA AACATGGACT GAAGTTATTA
AGTCAGTCAA AAAACTTAGG AATACGAGCT CTTATCGAAG AATGTGGTTT AGAACAAAAG
CGAATTAGTG CTTATCATAT AGGATTTGTG ATTGGACCGT GTTTTAATGC GGCTGGAAGA
CTAGATACGG TTGCTGTTGC ACTTGATTTA TTAGATGCCA AAACAACGGA AGAAGCAAAA
CAATTAGCAG TATCCTTAAA GAAATTAAAC GATAGCCGTA AGGATATGAC GTTACAAGGT
GTAGAACAGG CGATTGAACG TATTGAAACT TCAGATTTAA TTCATGACAA AGTTTTAGTT
GTGAAGTTAA GAGATACTCA TGAAAGCTTG GTTGGAATTA TCGCTGGACG TCTCAGAGAG
CGTTATAACA AACCAGCACT TGTTTTTGTT GATGTAGAAC AAGGTGTGAA AGGCTCTGGT
CGTTCCATTG AAAGCTATAA TATGTTCGAA GAACTATTAA AGTGTAAGGA CTTATTAACA
AAGTTTGGTG GCCATCCTAT GGCAGCAGGG CTTTCGTTAA AAGCAGAAAA TCTCGAAACT
TTAAGAGCTA GATTAAATCA AAATACTACC CTTTCAGAGG AAGACTTGAT TCCTATTGTT
CGAATCGATA TCCCACTTCC GATTGGTTAT CTTAATGAAG CTTTTTTAGA AGAATTAGAG
AAGCTTGAAC CATTTGGAAA AGGAAATATT AAACCGGTGT TTGCAGAACA ACACTTTAAA
ATACGCCAAG CTCGAATTCT AGGAAAGAAT CAGAATGTGT TAAAACTTAA TATTATCAAT
TCCGAGGGAT TTGCGATGGA TGCCTTGTAT TTTGGGGATA TCACTGAATT CAATGAGTTT
GCCGAAATGG AATACGGAAA AGAAGAAGTA AGAAAGATGT ATCTTGGGCA ATATAATGAG
GTAGACTTAG CATTTACGTA TTATCCTACA CTTAATGAAT ATATGGGAAA TCGTACTGTA
CAAGTAATTA TTCAAAATTA TTGTCGAATA AAAAGATAA
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| Protein sequence | MKEKWMLEAK RADFEALANR LAISPVLARI IVNRGLSEED EMQRYLSCDL TEMYSGLMMK
GMEQARNLII TAVEENQLIA IGTDFDNDGI LSGHSLSTAL KRIGGRVVVY APDRISEGYG
LNRRIVLEAY EAGSRLIITC DNGIAVFDAI DYAKELGMTV VVTDHHEVAF EEDENGSRTF
LLPNADVVVN PKQEGCPYPF KGLCGAGVVY KLIELLYEYY SVPKEELYDL LEFIAIATVA
DVMDLVSENR LIVKHGLKLL SQSKNLGIRA LIEECGLEQK RISAYHIGFV IGPCFNAAGR
LDTVAVALDL LDAKTTEEAK QLAVSLKKLN DSRKDMTLQG VEQAIERIET SDLIHDKVLV
VKLRDTHESL VGIIAGRLRE RYNKPALVFV DVEQGVKGSG RSIESYNMFE ELLKCKDLLT
KFGGHPMAAG LSLKAENLET LRARLNQNTT LSEEDLIPIV RIDIPLPIGY LNEAFLEELE
KLEPFGKGNI KPVFAEQHFK IRQARILGKN QNVLKLNIIN SEGFAMDALY FGDITEFNEF
AEMEYGKEEV RKMYLGQYNE VDLAFTYYPT LNEYMGNRTV QVIIQNYCRI KR
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