| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0709 |
|---|
| Symbol | |
|---|
| ID | 5743825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 919637 |
|---|
| End bp | 920515 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641291821 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001557835 |
|---|
| Protein GI | 160878867 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAATC TTTTTGAAAA AAGTGATGTG TTAAATGCAC CAGTAGAAGC ATTTTATTTT
GATACCCGAT ATGATAACTT TCCGATTCGT CCTCATTGGC ATTATTTTAT GGAAATCATC
TACATGTTAG ATGGTAGGGC ACAAATAAAT GCGGGTGAAG AATCTCATCT GCTCTTCGCC
GGTGATATGG CAATCTTTCA TCCCAAAATG GTACATGCAA TTTATGCGGT TACTTCGGAA
CCAATTCACT ATGCGGTTTT AAAATTTGAT ATTAACCGAT TGCAATTGAC TTCAAAGTAT
GCACCTAAGA TGAGGATATT GTTTCAGAGT GCAGAAGGGA ATCCTGCATG CCCCATCTAT
CTTTCTGCTA ATAGTTTAAT TCATGTAGAT ATCCGTTCAC AAATCCTCCC TTGTATCCAT
GAAATAAAAG AAAAAGATTA TGGTTATGAC GTAATTCTTC AAGCAAAACT TTACATATTA
CTTTCAGAAA TTATTCGAAT TTGGAGAAAA AATGGGTTCG ATACGTCTAA ATTATTACCT
TCTAATGACG AAGTAGATAC AATTTACACC ATTACAGAAT ATATGGATGC TCATTGTACC
GAACCAATTA AGGTGGTTGA TATTGCAGCG AAGTGCAATA TGAGTTATAG CCATTTTGCA
AAGAGTTTTC GCGCTATCTA TGGGCAGACC TGTAAAGATT TTTTAGAATA TCTTCGTGTT
TGCAAAGCAG AAAATTATCT ACTTTTTACA GAATATGACC TTACCTATAT CAGCCAAGAA
ACCGGATTTT GTGACTGCAG CCACCTTATT AAAGCATTTA AAGATGTGAA AGGAATTACG
CCAAAACAAT ATCGCCTACA GCATAAGGTA ACCAGATAA
|
|---|
| Protein sequence | MQNLFEKSDV LNAPVEAFYF DTRYDNFPIR PHWHYFMEII YMLDGRAQIN AGEESHLLFA
GDMAIFHPKM VHAIYAVTSE PIHYAVLKFD INRLQLTSKY APKMRILFQS AEGNPACPIY
LSANSLIHVD IRSQILPCIH EIKEKDYGYD VILQAKLYIL LSEIIRIWRK NGFDTSKLLP
SNDEVDTIYT ITEYMDAHCT EPIKVVDIAA KCNMSYSHFA KSFRAIYGQT CKDFLEYLRV
CKAENYLLFT EYDLTYISQE TGFCDCSHLI KAFKDVKGIT PKQYRLQHKV TR
|
|---|
| |