Gene Cphy_0636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0636 
Symbol 
ID5741685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp828528 
End bp829865 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content36% 
IMG OID641291748 
Productaspartyl-tRNA synthetase 
Protein accessionYP_001557762 
Protein GI160878794 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0017] Aspartyl/asparaginyl-tRNA synthetases 
TIGRFAM ID[TIGR00458] aspartyl-tRNA synthetase, archaeal type 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTTG TAACAGGTAA GAAAGAAGAA AAAACAGTTT TATTAAGCGA GATCATTTCT 
GGAAATTATA CTCACAAATC CGTTGTATTG CGCGGTTTCG TTCACACCGT ACGTGATATG
AGTGAATTTT CGTTTCTTGT AATTCGAACC TTTGAGGGAA TTATACAGTG TGTTACTTCA
ACAGAAGTTA CAAAAGATGT AGTTGCCTCA CTGAAAGAAG GCATGACGGT AGAAGTACAG
GGTGAGGTGC ATGAGGAATT AAGAGCACCA AATGGTTATG AAATTATCTT AACAAGATTA
TTAATATTAT CTGAGCCAGC GAAAGATAGT ACTATGCCAT TACCAATCTC TAAGTGGAAA
TTAAATACTT CGCTTGAGGC AAAGCTATCC TTAAGACCAA TCGCTCTTCG TAACATAAGG
GAGAGGGCAA TCTTTAAAAT CCAAGAAGGT ATCGTAAGAG GTTTTCGTGA TTTCTTATTC
TCGGAGCACT TTACTGAAGT TAGAACACCT AAGATTGTTG CAGGAAATGC GGAAGGTGGT
GCGAATGTTT TTAAACTAGA GTACTTTGGT AAAAAAGCAT TCCTAGCACA AAGTCCTCAG
TTTTACAAAC AGACAATGGT GGGTGTTTAC GATAGAGTTT TTGAAGCAGC ACCAGTATTT
CGTGCAGAAA AACATAATAC TACGAGACAC TTAAATGAAT ATACAAGTCT TGATTTTGAG
ATGGGATATA TTGATTCCTT TGAAGATATT ATGAACATGG AAACTGCAAT GTTGACTTTT
ATCTTTGAAT TACTTTCTAA AGATTATAAG AAAGAATGCG AAATCTTAGG GATCAACTTA
CCAAAAACAG ATAAGATTCC AGCGGTACGT TTTGATGAGG CAAAGCAGTT GGTTTCCGAG
AAATATGACC GAAAAATAAA AAATCCGTTT GACTTAGAAC CGGAAGAAGA AGTTTTAATT
GGACGTTATT TTAAAGAAGA ATATGATTCT GACTTTGTAT TTGTCACTCA TTATCCTTCA
AAGAAACGAC CATTTTATGC GATGGATGAT CCAAGCGATA AAAGGTTTAC TTTAAGTTTT
GATTTATTGT TTAAAGGAAT GGAGATTACT ACTGGTGGTC AAAGGATTCA TAATTATGAA
GAACAGGTAG CAAAGATGAA AGACCGTGGT ATGAATATAG AGGACTTCGA ACACTACCTT
ATGATTCATA AACATGGAAT GCCGCCACAT GGAGGGTTAG GAATTGGGTT AGAGCGTTTG
ACGATGCGCT TACTAGAGGA AGCCAATGTA AGAGAAACAT CGTTATTTCC TAGAGATGTA
TCACGACTTG AACCATAA
 
Protein sequence
MQFVTGKKEE KTVLLSEIIS GNYTHKSVVL RGFVHTVRDM SEFSFLVIRT FEGIIQCVTS 
TEVTKDVVAS LKEGMTVEVQ GEVHEELRAP NGYEIILTRL LILSEPAKDS TMPLPISKWK
LNTSLEAKLS LRPIALRNIR ERAIFKIQEG IVRGFRDFLF SEHFTEVRTP KIVAGNAEGG
ANVFKLEYFG KKAFLAQSPQ FYKQTMVGVY DRVFEAAPVF RAEKHNTTRH LNEYTSLDFE
MGYIDSFEDI MNMETAMLTF IFELLSKDYK KECEILGINL PKTDKIPAVR FDEAKQLVSE
KYDRKIKNPF DLEPEEEVLI GRYFKEEYDS DFVFVTHYPS KKRPFYAMDD PSDKRFTLSF
DLLFKGMEIT TGGQRIHNYE EQVAKMKDRG MNIEDFEHYL MIHKHGMPPH GGLGIGLERL
TMRLLEEANV RETSLFPRDV SRLEP