Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0595 |
Symbol | |
ID | 5743509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 773196 |
End bp | 774245 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641291707 |
Product | LacI family transcription regulator |
Protein accession | YP_001557721 |
Protein GI | 160878753 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000015362 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATGGGA AATATGCAAC TTTAAAGGAT GTAGCAAAAT TAGCTGGTAC AACAGCATCT ACTGTATCAT ATGTACTAAA TGATTCTAAA GAACGCTATA TTAGTGATGA AATGAGACGA CGTGTTCTTG AAGCTGCAAA AGATTTAAAT TATGTTAAAT GTAGTGTGGC AAGTAGTTTA AAAGGAGAGA AAAGAAAAAT TATTGCTGTA TTAGTTCCGC AGTTTTCGAA TCAATTTTTT ACCAGAATAA TTTTAGCTAT AGAAAATGTT GCCGATCAAT TTGACTATGT CTTAACAATA TATAATACTT TCGATGATCC TAAGAGAGAA AAGGTCATTA TTAATAGGAT GGCACAGCAC AGAATGGATG GTTACATTAT TATTCCAACT TACGAGGGAG TAAAAAATAC TGAGCAATTA AGAAAAATTG GAATTCCTAT GGTAGTAATG GACCGTCCTT TAGAGGGTAT AGATGATTTC ATTTGGGTAA CCACTAATAA TTATCAATGT GGTTATAAAG GAGCACATTA TCTTGCTTTA AAAGGACATC GTAACATTGC TTTCATTGGA TGGAATTCTC GAATTAACGA TCTAGATTCT AGAAAAAATG GATTTTGGGA TGCACTAGCA GCTAGTGGAA TAACTTCAGA GGAAGCAATT GTAATTGATG GTGAATTTAG TGAGGAAGAC GGATATAAAA TGACCAAAAA TCTGTTGAAA ACAAGGCCTG ATATAACAGC AATTTTCTAT GGATATAATG TACAAGCTCA GGGTGGAGTA AGATATTTGA TGAAAGAAAA TATTGAAATT GGTAAAGATA TATCTGTTAT GTTGATTGGA TCTCCTGAAT GGGCAGTGAC AGGGTACAAT AATTTTACTC ATATTGAACA AGATGAATAC AATTTGGGTA AATCAGCAGC CACCATCTTG TTTTCAATTA TCAATGGTGA GAATCAAGAA AATATTCAGA ATATTATTCA GGATTGTTCC CTGTATGAGG GAAATTCTGT TTATGATATT ACAAAAACAA AAAAGGAGAG AATGTTATGA
|
Protein sequence | MNGKYATLKD VAKLAGTTAS TVSYVLNDSK ERYISDEMRR RVLEAAKDLN YVKCSVASSL KGEKRKIIAV LVPQFSNQFF TRIILAIENV ADQFDYVLTI YNTFDDPKRE KVIINRMAQH RMDGYIIIPT YEGVKNTEQL RKIGIPMVVM DRPLEGIDDF IWVTTNNYQC GYKGAHYLAL KGHRNIAFIG WNSRINDLDS RKNGFWDALA ASGITSEEAI VIDGEFSEED GYKMTKNLLK TRPDITAIFY GYNVQAQGGV RYLMKENIEI GKDISVMLIG SPEWAVTGYN NFTHIEQDEY NLGKSAATIL FSIINGENQE NIQNIIQDCS LYEGNSVYDI TKTKKERML
|
| |