| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0588 |
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| Symbol | |
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| ID | 5743502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 759190 |
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| End bp | 764469 |
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| Gene Length | 5280 bp |
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| Protein Length | 1759 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641291700 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001557714 |
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| Protein GI | 160878746 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGAGA TAGGAATAAG AAAAACACAT GATCGGTTAA CAAACAAATT AGTTGATTAT
ATTAAGGCAC AGTATTTTGC TGAGAATGAT TTGCTTACCG ATGCAGCAGA TGAGCTTCTA
TTTAATGAAG ATACAATATT TCAGGAGCCA TTTATTGAAG TTACCAAGAA CTATAAAATG
TCACAAGATG GTTTTAATTC TTCAAGATTA GATTTGGAAC GAAAGAATAT TCTAAATCAA
TTAACTAATG CTGAATTAGG TGTTTTTGTA ACACCATTCA ATCACCAGAT AAAAGCAATA
GAGCAATATT ATTCTTCTCA TGATGTTATG GTAACTACGG GAACAGGTTC AGGTAAAACA
GAATGTTTCT TATGGCCAAT TTTAACAGAT TTAATATATG AAGCAAGAAC GAATGAAGCT
TCCTGGGAAC AAGAAGGGAT AAGAGCATTA GTGCTATATC CAATGAATGC ATTAGTCTCT
GACCAGCTAG GAAGAATGAG AAATATTATC GGTAGAAAAA AAGATGATGC ATATCATAAA
ATACTTTGCA ATGGTAAGTA TAAGCGGAGA GCCAGATTCG GGATGTATAC AGGAAGAACA
CCGTATGCAG GAAATGATAA TGCGGATAAA AATAAAGATC TTGGTAAGGT AATAGAAAAG
AATTATCTAA AGTCAGAAGT ATATGAAGAG TTATTAAAAG TTGGCCGAAT TCCTTCAAAA
GATTTAACGA AGTTTGCTGA ACATTTATCA AGGGGAGTTC AAGTTACGGG AAAATTGGAT
TCAGAATTGT ATACACGTGG AGAAATGCAA AAAATCTGTC CGGATATTCT TATTACAAAT
TATTCCATGT TAGAATATAT GTTAATGCGT CCGATTGAAG AGGAATTATG GAGTAAAACA
ATTAAATGGC TAAATGCATC TGAGGATAAC AAATTGTTAC TTGTCATTGA TGAAGCACAT
ATGTATCGAG GAGCCTCGGG TGGTGAGGTA GCTTTACTGA TACGAAGATT AATGAATAAA
TTAAATATTT CATCTAATAA AATGAAGTGT ATTCTTACAA GTGCTAGCGT TCCATATGAT
AAAAATGATG AATTGCAAAA GTTTGCTTGC GGTCTTACGG GAAGAGTATA TCAAGAAAAT
CAATTTTCTA TTGTAAGAGA AGAAATAAAA GCAATTAAAA ATGCAAAGCG TGGAACATAT
GAACAAGCGC AGAGTTATGC GGGATTATCA TTAGAAAGTC TTCAGTCAGA AGTTGCATTA
CGAAAAGGTG AATATGAAAA AATAAGTAGA ATGAATCAAT GGAGTAAAAT CCCAAAAGAT
GAAATAGAAA TATCACGCTG GTTATATGAC AATCTATCTT GTGATTCTTT GATGAAGCAA
ATTATTACGA TTTGTGAAAA GGGAGCAAAG CCATTATCAA AAATAGCAAA AGAGGTTTTC
GAAGATAATG TGCCAAAACA ACTTGCTGAA CAAGCACTTG AAAGGTTACT GCAATTAGGT
ATTACAGCAA AATCCAGTAC AAATAAGGTG TTACTGGGAT CTAAGGTTCA TATGATGTTC
AAAGGATTAC AGGGAATATA TGTTTGTACC AACCCTAATT GCAAAAAACT GCATTCTGGT
ATGGGGATTT ACCTTGGATA TATTTCTAGT AAATATACAG AGACTTGTCC AGAATGTAAT
GGAAGAATGT ATGAATTAAT GATGGATCGT CGATGTGGTA CCTTATATAT AAGAGCATTT
GATGATCAGA ATATTGAAAA TTATGATGGT CTTGAATTCC TTTGGTCTAG AAATAACCAG
ATTATGAAAG AGCCTAAAGA AATTCATCTA TGGATTATGC CAGAGGGTAG AATTGATTTT
TTTAAACTAG GAAAGAAGAC AGGAAAAGCA AAAAAGAATT CAACGGTTGG ATATCTTGAT
TCAAAGACTG GCCTTCTATT TAGAGATGAA TCACATGCAG GGGACGAAGG ATATTTAAAA
GTATTGATTT CAAGTACCTT TAATGAGGAT GTATTAGCAT TTACATTCAA CACTTGCCCG
AATTGTGGTA GAGATCATAA TAAAATAACT CCATTTTTAA CAAGAGGTAA TGAACCCTTT
GCCAATATAG TAAAAGAACA ATTTGAGGTT CAACCAGATA TAAAGTCAGA GTTAAAAAAT
GGAGGAAAGA AAGTATTGCT TTTTTCTGAT AGTAGACAAA GAGCAGCTAC TTTAGCACGT
GATATGACAA TTGCTTCAGA TGGTGATTCA GGCAGACAAG CAATCTTTAT GGCACAAAAA
CTTTTAGATG ATAGCTCCGG AGAAAGTACA ATCGACTTGT TATATTATGC TTTTCTAAAA
GTCGTGTATG ATAATAAGCT TAGCTTCTTT TATGGAAAAG AAAAGGAGAT GTTCAAGAGG
CAGCTAAAGA AATATGAAGA ACTTTATTCA TCTCGAACTA TTCGGAAATT CGATAGACTC
AAGTCTAATA TAGGAAATCC ACCAGATATG TTTTATCAGT TACTATTAAA GAATATTAGT
GATAGTTATA GATCATTGAA TAACTTAGGT TTAGCACAGG TAGTATTAGC TGATCAAGGG
GACGCGGGAG AGGAAATTGA ATACCAAATT CTTGAGAAAG TTGAAAATTT AACAGGTATC
TCAGGTACAG ATGTATACAG CATCTATAAT ACTTGGATTC AATATTTAAT TGTTAATAAA
ATTGCCATTT TCCCTGAAAT AGGCGATGAT GTAAGAGATA GTATTTTAGC ATATGAGCGA
GGGAGATTTG GTATTGATGA AATTGCAAAA TTCCCAGAAT TTCTAAATGA TATTATCAAA
GAAAAATATG ATGAATCAGT AATTCAAGCT TTAATTGATA GGTTTGATGA TATAACACAA
ATATTACAGT CGCCAGGAAG AAACCATAAT CGTAGATATC TATTTGGAAC AAGATTAATC
CTTAAAGCGG CAGAAAATTC AGAATGGATT AAATGCGATC GCTGTGCAGG AATATCTACT
TATACTTTGT GGGGGCATTG CATATATTGC GGTAGTACAG AGTATGTACG CAAGGTAGAT
GATGAACATT TTAAAAGATA TCTATTATGG AGAAAGCCTG TAATAGATGC TCTTAATAGG
GAGAGAATTC ATAATATCAT TACGGAAGAG CATACGGCAC AATTATCTTA TAAAGATAAC
AAGAAAGATG TATGGGGTAC TACAGAAAAG TATGAATTAG CATTTCGAAA TATTACACTC
AATGAGGATG AAGAACCAAT TGATGTGCTA AGTTGCACAA CAACAATGGA AGTGGGAATT
GATATTGGTT CACTTACAAG TGTAGGTTTA AGGAATGTTC CTCCAATGCG AGAAAATTAT
CAGCAGAGAG CAGGACGTGC AGGACGTGCA GGTGCAGCTG TATCATCTAT TGTAACATAT
ACAGAAAATG GACCTCACGA TTCATGGTAT TTTAAACATC CAGAGCAGAT TATATCAGGT
ATACCAAGAA CTCCATGGAT TGATGATAAG AATACAAAAT TAATTAGACG GCATATTAAT
TTAATATTTT TGCAGGAATT TTTCTATACA ATACGAAGCG GTTTAGATGT GATTAGAACA
TTGGATTTCT TTAGTTATGA GGATAAATAT AATTATATTG AATTCCTAAG ATGGTTAAAA
GAAAGAATAC CAATGTCATA TGAGAGACAA AGAGTATTAA TTCCAACGGG AGATTTTAAT
TGGAAAGGGT ATTATAAAGA GATTAGTAAG ACACTAGAAA ACATCGCAGA TAAAGTTGAT
GAGGCACCTT TTATATTTGA ACAAACTTCC AGATCTGATG AGAATGAATC AGATTCAGTA
CGATTAATTG ATGTCCTATT TTCTGAAGGT GTACTTCCAA ATTATAGCTT TCCACGTAAT
ATCGTACATT TCTGGATAGA GGACTTATAT GGTAATGTTA AAGAGAGTCC AGAACGAAGT
GTGGATATAG CCCTAAGTGA ATATGCTCCA GGAAGATCTC TTGTAGTAAA CAAACAAACA
TACATTTCAG GTGGTATATA TGATCATTAT ACCAAGTATC ATAGAGAATA TAAGTACAAA
GCAGCTGAGC CATGGCTAGA GTTAGATGAA TATAAAAAGG TAGTATCATG TTGTACTAAT
CCGTTATGTG GATGGTTTGG CGTAAATGAA ACTTATGATG AGTGTCCACT GTGTAAGAAT
ACGTTAGAGA AGCATACAAT GATTAAACCT TGGGGGTTTA CAGCAAGAGA AGGAAAGTCA
ATTCCTGAAA CACACGAGAG TCAGGAATTG TCATATGTGA GCGTACCTTC ATATTCATCA
ATGCCATCAG GTATTGTAAT GAGTAAAGTA GGTTCAGCTG GTTATGCAGA AATAGAGAAT
AGAGAAAATC AAAAATTAGT TATTGTAAAT CGCGGCCCAG AGGACAAAGG ATTTGAGATG
TGTTCAATAT GTGGAGCAAT TGAACCTAGT ATTGGACAAC CTTCTGACAG GAATAATAGG
AAAAGACCAT ATAGAAACCT ATATATCAAA GATGATACCA TGAGATGCCA TCATAATTAT
TCAAATATTT TCTTAGGATA TGAGTTTAAT ACAGATATGA TGGTTCTTGT AATTAAACTC
GATAGTAACA AAGTTGATCT AAGTACAGGA TTTAATATTT GGTTGATTCC AGCATTGACT
ACCTTTGCAG AAGCACTAGT ATTAGCAGCG AGCAGAGAGC TTGATGTAGA ATTTAGTGAT
GTTAAAAGTG GTTATCGTAT TAGGATGGTA GGTAGTGATA TTTATGCAGA TATTTATCTA
TACGATGGAT TGAGCTCAGG TGCTGGATAT GCAGTCAAGG TATCAGAGGT AATTGAATCT
GTATTAAATA GAATGAAAGA GATATTTGAA GGATGCAATT GTTCAGCTTC GTGTCCTAAC
TGTCTTGAGC ATTATTGGAA TCAGCGAAAT AAGGGAAAGT TAGATCGGTT CCTAGGAAAA
GATTTTTTAG AGTTTATTAC TAGTGGTAAA TTGAGAACAG AAGTAACATC ACAAGAAAAA
AAATATTATA TAGATCAAAT AAACCATATA GCACAACTAC AAGGCTACGG GATTATTTTC
TTCAATCGAA ACGGAAAATA TATTATCAAT AGCAGACAGG GAGAAAAAGA AGTGATTATT
TATCCTTCAA TGTGTAATAG TGAAATATTT GAAGGTACAG ATAAACTTTT CTTATCGGAT
CGATTATGCA GATATGCTAT GCCAGAAATA TGGAATAAAG TTAGAAATGA GGTGTGGTAA
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| Protein sequence | MREIGIRKTH DRLTNKLVDY IKAQYFAEND LLTDAADELL FNEDTIFQEP FIEVTKNYKM
SQDGFNSSRL DLERKNILNQ LTNAELGVFV TPFNHQIKAI EQYYSSHDVM VTTGTGSGKT
ECFLWPILTD LIYEARTNEA SWEQEGIRAL VLYPMNALVS DQLGRMRNII GRKKDDAYHK
ILCNGKYKRR ARFGMYTGRT PYAGNDNADK NKDLGKVIEK NYLKSEVYEE LLKVGRIPSK
DLTKFAEHLS RGVQVTGKLD SELYTRGEMQ KICPDILITN YSMLEYMLMR PIEEELWSKT
IKWLNASEDN KLLLVIDEAH MYRGASGGEV ALLIRRLMNK LNISSNKMKC ILTSASVPYD
KNDELQKFAC GLTGRVYQEN QFSIVREEIK AIKNAKRGTY EQAQSYAGLS LESLQSEVAL
RKGEYEKISR MNQWSKIPKD EIEISRWLYD NLSCDSLMKQ IITICEKGAK PLSKIAKEVF
EDNVPKQLAE QALERLLQLG ITAKSSTNKV LLGSKVHMMF KGLQGIYVCT NPNCKKLHSG
MGIYLGYISS KYTETCPECN GRMYELMMDR RCGTLYIRAF DDQNIENYDG LEFLWSRNNQ
IMKEPKEIHL WIMPEGRIDF FKLGKKTGKA KKNSTVGYLD SKTGLLFRDE SHAGDEGYLK
VLISSTFNED VLAFTFNTCP NCGRDHNKIT PFLTRGNEPF ANIVKEQFEV QPDIKSELKN
GGKKVLLFSD SRQRAATLAR DMTIASDGDS GRQAIFMAQK LLDDSSGEST IDLLYYAFLK
VVYDNKLSFF YGKEKEMFKR QLKKYEELYS SRTIRKFDRL KSNIGNPPDM FYQLLLKNIS
DSYRSLNNLG LAQVVLADQG DAGEEIEYQI LEKVENLTGI SGTDVYSIYN TWIQYLIVNK
IAIFPEIGDD VRDSILAYER GRFGIDEIAK FPEFLNDIIK EKYDESVIQA LIDRFDDITQ
ILQSPGRNHN RRYLFGTRLI LKAAENSEWI KCDRCAGIST YTLWGHCIYC GSTEYVRKVD
DEHFKRYLLW RKPVIDALNR ERIHNIITEE HTAQLSYKDN KKDVWGTTEK YELAFRNITL
NEDEEPIDVL SCTTTMEVGI DIGSLTSVGL RNVPPMRENY QQRAGRAGRA GAAVSSIVTY
TENGPHDSWY FKHPEQIISG IPRTPWIDDK NTKLIRRHIN LIFLQEFFYT IRSGLDVIRT
LDFFSYEDKY NYIEFLRWLK ERIPMSYERQ RVLIPTGDFN WKGYYKEISK TLENIADKVD
EAPFIFEQTS RSDENESDSV RLIDVLFSEG VLPNYSFPRN IVHFWIEDLY GNVKESPERS
VDIALSEYAP GRSLVVNKQT YISGGIYDHY TKYHREYKYK AAEPWLELDE YKKVVSCCTN
PLCGWFGVNE TYDECPLCKN TLEKHTMIKP WGFTAREGKS IPETHESQEL SYVSVPSYSS
MPSGIVMSKV GSAGYAEIEN RENQKLVIVN RGPEDKGFEM CSICGAIEPS IGQPSDRNNR
KRPYRNLYIK DDTMRCHHNY SNIFLGYEFN TDMMVLVIKL DSNKVDLSTG FNIWLIPALT
TFAEALVLAA SRELDVEFSD VKSGYRIRMV GSDIYADIYL YDGLSSGAGY AVKVSEVIES
VLNRMKEIFE GCNCSASCPN CLEHYWNQRN KGKLDRFLGK DFLEFITSGK LRTEVTSQEK
KYYIDQINHI AQLQGYGIIF FNRNGKYIIN SRQGEKEVII YPSMCNSEIF EGTDKLFLSD
RLCRYAMPEI WNKVRNEVW
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