Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0416 |
Symbol | |
ID | 5745176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 528520 |
End bp | 529173 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641291528 |
Product | TrkA domain-containing protein |
Protein accession | YP_001557542 |
Protein GI | 160878574 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000130553 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAAGAA AAGAATTTGT AGTTTTTGGA TTAGGCCGTT TTGGTAAAAG CGTAGCAACC ACGCTTGCAG AAGGTGGATG TGAAGTAATG GTTGTAGACA ACGATGAAGA TAAAATACAT GAAATTGCGG ATTATGTTAC TTATGCGGTA CGAGCTGATG TAACAGAAGC CGAATCATTA GAAAGCCTTG GTCTGAGAAA TTTTGATGGT GCAGTTATAG CGATTGGTGA GAATTTAGAG GCAAGTGTTA TGGTAACAAT ACTTGTAAAA GAGTTAGGAG TACCTTACGT TCTTGCGAAG GCACAAAATG AGCTACATGC GAAAGTGCTA AAGAAGGTTG GAGCTGATAT GGTGGTATTT CCAGAGAAAG AAACTGGAAT CCGTATCGCA AACAATTTGA TGATGGGAAA TTTCTTTGAT GCAATTGAAT TGTCTTCTAC ATCTAGCATG ATGGAGCTTG ACATCTTACA AGAATGGATA GGACATTCTT TACGAGAGTT AAATTTACGC GCTAAAAATA AAATTAATGT AATTGGGATC AAAAGAGATG ACCAGCTTAA TATCAATCCA GATGCAGATA TGCCACTGGA AAGAAATGAT GTATTAGTTA TCATCGGTAA AAATGAGATA TTAAATAAGT TAGCGAATCA GTAA
|
Protein sequence | MARKEFVVFG LGRFGKSVAT TLAEGGCEVM VVDNDEDKIH EIADYVTYAV RADVTEAESL ESLGLRNFDG AVIAIGENLE ASVMVTILVK ELGVPYVLAK AQNELHAKVL KKVGADMVVF PEKETGIRIA NNLMMGNFFD AIELSSTSSM MELDILQEWI GHSLRELNLR AKNKINVIGI KRDDQLNINP DADMPLERND VLVIIGKNEI LNKLANQ
|
| |