Gene Cphy_0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0379 
Symbol 
ID5742247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp482373 
End bp484802 
Gene Length2430 bp 
Protein Length809 aa 
Translation table11 
GC content39% 
IMG OID641291491 
ProductATP-dependent protease La 
Protein accessionYP_001557505 
Protein GI160878537 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0466] ATP-dependent Lon protease, bacterial type 
TIGRFAM ID[TIGR00763] ATP-dependent protease La 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00242685 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAT ATACGAGACA ACTGCCCGTG GTGGCTCTAA GAAATATGGC AGTCATGCCC 
GGGATGTTGA TTCATTTTGA TGTTAATAGA AAAGTAAGTA TTGAAGCAAT TGAAGCAGCA
ATGCTCTTAA ATCAACAGGT ATTATTAGTT TCACAGATTG ATGCAGAGAC TGAAAATCCA
ACAGCCGATG ATTTGTACCG AGTAGGAACA ATAGCAGAAA TTAAACAGAT GATAAAACTC
CCTGGGAATG TAATACGTGT TTTGGTTACT GGTTTAGAAC GAGCAACCCT AGATTCTTTA
GTATCAGAAC AGCCATATCT AAAAGCTCAG CTAACATCCA AGGAAGCGGA GCTTCTTAAC
TTAACTGAGG CAGAAGAAGA AGCAATGGTT CGTGCTCTAA GAGATTTATT CGAGGTATAT
ACCACTGAAA ATAATAAGCT AAATAAGGAT ATTATTCGTC AAGTGGAAGC TTCCAGAGAA
ATTGAAAAAA TGGTGGAGCA ACTCTCGATT CATATCCCTA TGACATTAGA GGATAAACAA
CTATTACTAG CAGCAAGTGA TTTAATGGAG CAGTATGAAC GCCTATGTTT AATCTTAGCA
GATGAAATAG AAGTTATGCG AATTAAAAGG GAACTTCAGA ATAAGGTTAA GGATAAAGTT
GACAAAAACC AGAAAGACTA CATAATGAGG GAGCAACTTA AGGTCATTAA GGAAGAACTT
GGAGAAACGA GTTCTGTTTC TGACATTATG CAGTATCTGG AGCAACTAAA AGAATTGGTT
GCTAGTGATG AAGTAAAAGA GAAGATTAAG AAGGAAATCG AACGTTTTCA AAACGTTGCT
GGAAGTAACT CAGAGAGTGC AGTAGCAAGA GGTTATGTTG AAACATTGCT TAGCCTACCT
TGGGACAAGG TAAGCGAAGA TTTTATGGAT TTGGCGTATG CGAAAGAGGT ACTTGAAACA
GAACACTATG GGTTAAAAAA GGTAAAGGAA CGTGTACTAG ATTTCTTAGC GGTGCGTCAG
TTAACGGAAA AAGGAGATAG TCCGATTATC TGTCTTGTGG GTCCTCCGGG AACCGGAAAA
ACTTCAATCG CCCGTTCAAT CGCTAAAGCT CTTAATAAGG AGTATGTCCG CATTAGCCTT
GGTGGTGTCA GGGATGAAGC GGAGATAAGG GGGCATCGAA GAACCTATGT GGGTGCTCTT
CCAGGCCGTA TTATTACTGG ACTTAAACAG GCAAAGGTGA AAAATCCTCT CATGCTTCTT
GATGAAATCG ACAAGATGAG CTCTGACTAT AAAGGGGATA CTGCATCCGC TATGTTAGAG
GTGCTTGATT CTGAGCAAAA TTGTAATTTT GTTGACCACT ACGTGGAAAT CCCAGTAGAC
CTATCAGAAG TTATGTTTAT TGCAACCGCA AATACAACAC AGACGATACC GAAACCTCTA
CTAGATCGTA TGGAAATTAT CGAGGTAAGT TCTTATACAG AAAACGAAAA ATTTCATATT
GCGAAAAATC ATTTACTTAA CAAACAAATA GAGAAAAATG GTTTAAAAAA GAGTCAAATC
AGTATATCAG AGAAGGCACT TAGGAAGATA ATTAGCGACT ATACTAGAGA AGCAGGAGTT
CGTGGTTTAG AGCGTAAGAT TTCAGAGGTA TGTAGAAAAA TTGCTAGAGA ATTGTTAGAG
CAGGAGTCTA AGGAGAATCA AAACCTTATC AAATCTGCAA AGAATAAGTC AAACAATAAA
AATCAAAGCC ATAGTGAGGT AGCAGCTGCT GTAGAGGCGG AGGAGATTAG TGTAACTACG
AAACCATCGA AGATAAAGGT AACAGAGAAA AATATCACTA CTTACCTTGG AAAGCCGAAG
TTTCGAAATG AAATCGCAAG CCAAAAGGAT GAAGTCGGAA TCGTATGTGG ACTTGCTTGG
ACTAGTGTAG GTGGAACTAC CTTACAGATA GAAGTAAATT CGTTACCAGG TAAAGGTGCC
TTGATACTGA CAGGCCAAAT GGGCGATGTG ATGAAAGAGT CCGCCCAACT TGGAATCAGT
TATATTCGTT CTCTAAGTAA GGAATATAAG ATATCAGAAG AATATTTTCA AAAAAATGAT
ATTCATATCC ATATTCCAGA AGGTGCTACA CCAAAAGATG GTCCGAGTGC AGGTATTACA
ATGGCTACAG CAATGTTATC TGCTATTACA GGCAAGAAGG TTCACGCAAA AGTTGCAATG
ACTGGGGAAA TAACACTTCG TGGTCGTGTA TTACCAATCG GCGGTCTAAA GGAAAAGCTG
CTGGCAGCAA AGAATACCGG GATTAAGAAA GTTTTAATTC CTGAAAAGAA TCGCCCAGAT
TTAGAAGAGT TAGAGCAAGA GATAACCGAG GGTATGGAAG TAATATGTGT TGCTACTATG
GATGAGGTTT TAAAACATGC GCTTGTGTAA
 
Protein sequence
MSEYTRQLPV VALRNMAVMP GMLIHFDVNR KVSIEAIEAA MLLNQQVLLV SQIDAETENP 
TADDLYRVGT IAEIKQMIKL PGNVIRVLVT GLERATLDSL VSEQPYLKAQ LTSKEAELLN
LTEAEEEAMV RALRDLFEVY TTENNKLNKD IIRQVEASRE IEKMVEQLSI HIPMTLEDKQ
LLLAASDLME QYERLCLILA DEIEVMRIKR ELQNKVKDKV DKNQKDYIMR EQLKVIKEEL
GETSSVSDIM QYLEQLKELV ASDEVKEKIK KEIERFQNVA GSNSESAVAR GYVETLLSLP
WDKVSEDFMD LAYAKEVLET EHYGLKKVKE RVLDFLAVRQ LTEKGDSPII CLVGPPGTGK
TSIARSIAKA LNKEYVRISL GGVRDEAEIR GHRRTYVGAL PGRIITGLKQ AKVKNPLMLL
DEIDKMSSDY KGDTASAMLE VLDSEQNCNF VDHYVEIPVD LSEVMFIATA NTTQTIPKPL
LDRMEIIEVS SYTENEKFHI AKNHLLNKQI EKNGLKKSQI SISEKALRKI ISDYTREAGV
RGLERKISEV CRKIARELLE QESKENQNLI KSAKNKSNNK NQSHSEVAAA VEAEEISVTT
KPSKIKVTEK NITTYLGKPK FRNEIASQKD EVGIVCGLAW TSVGGTTLQI EVNSLPGKGA
LILTGQMGDV MKESAQLGIS YIRSLSKEYK ISEEYFQKND IHIHIPEGAT PKDGPSAGIT
MATAMLSAIT GKKVHAKVAM TGEITLRGRV LPIGGLKEKL LAAKNTGIKK VLIPEKNRPD
LEELEQEITE GMEVICVATM DEVLKHALV