Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0379 |
Symbol | |
ID | 5742247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 482373 |
End bp | 484802 |
Gene Length | 2430 bp |
Protein Length | 809 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641291491 |
Product | ATP-dependent protease La |
Protein accession | YP_001557505 |
Protein GI | 160878537 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00242685 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGAAT ATACGAGACA ACTGCCCGTG GTGGCTCTAA GAAATATGGC AGTCATGCCC GGGATGTTGA TTCATTTTGA TGTTAATAGA AAAGTAAGTA TTGAAGCAAT TGAAGCAGCA ATGCTCTTAA ATCAACAGGT ATTATTAGTT TCACAGATTG ATGCAGAGAC TGAAAATCCA ACAGCCGATG ATTTGTACCG AGTAGGAACA ATAGCAGAAA TTAAACAGAT GATAAAACTC CCTGGGAATG TAATACGTGT TTTGGTTACT GGTTTAGAAC GAGCAACCCT AGATTCTTTA GTATCAGAAC AGCCATATCT AAAAGCTCAG CTAACATCCA AGGAAGCGGA GCTTCTTAAC TTAACTGAGG CAGAAGAAGA AGCAATGGTT CGTGCTCTAA GAGATTTATT CGAGGTATAT ACCACTGAAA ATAATAAGCT AAATAAGGAT ATTATTCGTC AAGTGGAAGC TTCCAGAGAA ATTGAAAAAA TGGTGGAGCA ACTCTCGATT CATATCCCTA TGACATTAGA GGATAAACAA CTATTACTAG CAGCAAGTGA TTTAATGGAG CAGTATGAAC GCCTATGTTT AATCTTAGCA GATGAAATAG AAGTTATGCG AATTAAAAGG GAACTTCAGA ATAAGGTTAA GGATAAAGTT GACAAAAACC AGAAAGACTA CATAATGAGG GAGCAACTTA AGGTCATTAA GGAAGAACTT GGAGAAACGA GTTCTGTTTC TGACATTATG CAGTATCTGG AGCAACTAAA AGAATTGGTT GCTAGTGATG AAGTAAAAGA GAAGATTAAG AAGGAAATCG AACGTTTTCA AAACGTTGCT GGAAGTAACT CAGAGAGTGC AGTAGCAAGA GGTTATGTTG AAACATTGCT TAGCCTACCT TGGGACAAGG TAAGCGAAGA TTTTATGGAT TTGGCGTATG CGAAAGAGGT ACTTGAAACA GAACACTATG GGTTAAAAAA GGTAAAGGAA CGTGTACTAG ATTTCTTAGC GGTGCGTCAG TTAACGGAAA AAGGAGATAG TCCGATTATC TGTCTTGTGG GTCCTCCGGG AACCGGAAAA ACTTCAATCG CCCGTTCAAT CGCTAAAGCT CTTAATAAGG AGTATGTCCG CATTAGCCTT GGTGGTGTCA GGGATGAAGC GGAGATAAGG GGGCATCGAA GAACCTATGT GGGTGCTCTT CCAGGCCGTA TTATTACTGG ACTTAAACAG GCAAAGGTGA AAAATCCTCT CATGCTTCTT GATGAAATCG ACAAGATGAG CTCTGACTAT AAAGGGGATA CTGCATCCGC TATGTTAGAG GTGCTTGATT CTGAGCAAAA TTGTAATTTT GTTGACCACT ACGTGGAAAT CCCAGTAGAC CTATCAGAAG TTATGTTTAT TGCAACCGCA AATACAACAC AGACGATACC GAAACCTCTA CTAGATCGTA TGGAAATTAT CGAGGTAAGT TCTTATACAG AAAACGAAAA ATTTCATATT GCGAAAAATC ATTTACTTAA CAAACAAATA GAGAAAAATG GTTTAAAAAA GAGTCAAATC AGTATATCAG AGAAGGCACT TAGGAAGATA ATTAGCGACT ATACTAGAGA AGCAGGAGTT CGTGGTTTAG AGCGTAAGAT TTCAGAGGTA TGTAGAAAAA TTGCTAGAGA ATTGTTAGAG CAGGAGTCTA AGGAGAATCA AAACCTTATC AAATCTGCAA AGAATAAGTC AAACAATAAA AATCAAAGCC ATAGTGAGGT AGCAGCTGCT GTAGAGGCGG AGGAGATTAG TGTAACTACG AAACCATCGA AGATAAAGGT AACAGAGAAA AATATCACTA CTTACCTTGG AAAGCCGAAG TTTCGAAATG AAATCGCAAG CCAAAAGGAT GAAGTCGGAA TCGTATGTGG ACTTGCTTGG ACTAGTGTAG GTGGAACTAC CTTACAGATA GAAGTAAATT CGTTACCAGG TAAAGGTGCC TTGATACTGA CAGGCCAAAT GGGCGATGTG ATGAAAGAGT CCGCCCAACT TGGAATCAGT TATATTCGTT CTCTAAGTAA GGAATATAAG ATATCAGAAG AATATTTTCA AAAAAATGAT ATTCATATCC ATATTCCAGA AGGTGCTACA CCAAAAGATG GTCCGAGTGC AGGTATTACA ATGGCTACAG CAATGTTATC TGCTATTACA GGCAAGAAGG TTCACGCAAA AGTTGCAATG ACTGGGGAAA TAACACTTCG TGGTCGTGTA TTACCAATCG GCGGTCTAAA GGAAAAGCTG CTGGCAGCAA AGAATACCGG GATTAAGAAA GTTTTAATTC CTGAAAAGAA TCGCCCAGAT TTAGAAGAGT TAGAGCAAGA GATAACCGAG GGTATGGAAG TAATATGTGT TGCTACTATG GATGAGGTTT TAAAACATGC GCTTGTGTAA
|
Protein sequence | MSEYTRQLPV VALRNMAVMP GMLIHFDVNR KVSIEAIEAA MLLNQQVLLV SQIDAETENP TADDLYRVGT IAEIKQMIKL PGNVIRVLVT GLERATLDSL VSEQPYLKAQ LTSKEAELLN LTEAEEEAMV RALRDLFEVY TTENNKLNKD IIRQVEASRE IEKMVEQLSI HIPMTLEDKQ LLLAASDLME QYERLCLILA DEIEVMRIKR ELQNKVKDKV DKNQKDYIMR EQLKVIKEEL GETSSVSDIM QYLEQLKELV ASDEVKEKIK KEIERFQNVA GSNSESAVAR GYVETLLSLP WDKVSEDFMD LAYAKEVLET EHYGLKKVKE RVLDFLAVRQ LTEKGDSPII CLVGPPGTGK TSIARSIAKA LNKEYVRISL GGVRDEAEIR GHRRTYVGAL PGRIITGLKQ AKVKNPLMLL DEIDKMSSDY KGDTASAMLE VLDSEQNCNF VDHYVEIPVD LSEVMFIATA NTTQTIPKPL LDRMEIIEVS SYTENEKFHI AKNHLLNKQI EKNGLKKSQI SISEKALRKI ISDYTREAGV RGLERKISEV CRKIARELLE QESKENQNLI KSAKNKSNNK NQSHSEVAAA VEAEEISVTT KPSKIKVTEK NITTYLGKPK FRNEIASQKD EVGIVCGLAW TSVGGTTLQI EVNSLPGKGA LILTGQMGDV MKESAQLGIS YIRSLSKEYK ISEEYFQKND IHIHIPEGAT PKDGPSAGIT MATAMLSAIT GKKVHAKVAM TGEITLRGRV LPIGGLKEKL LAAKNTGIKK VLIPEKNRPD LEELEQEITE GMEVICVATM DEVLKHALV
|
| |