| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0378 |
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| Symbol | clpX |
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| ID | 5742246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 480918 |
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| End bp | 482219 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641291490 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_001557504 |
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| Protein GI | 160878536 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000166116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAAATA GAACAGAAGA TAGAAAACAG GTTAGATGCT CATTCTGCGG AAAGTCTCAG
GAACAAGTTC GTAAGCTTCT TGCAGGACCA GGGGATGTCT ATATCTGCGA TGAATGTATT
GAGCTCTGCT ATGAGATTGT GGAGGAAGAA TTCGATGATG ATGTGGCAGA GTCTGCATCC
GGCATTAACC TCTTAAAACC AAAGGAAATT AAAGAATTTT TAGATCAATA TGTCATTGGA
CAGGAAGAAG CAAAAAAAGT TCTTTCTGTA TCCGTTTATA ATCATTATAA ACGTGTATTA
TCAGAGAAAG ATTTAGACGT TGAGTTGCAG AAGAGCAATA TTCTGATGAT TGGACCGACC
GGTTCCGGTA AAACCTATGT TGCACAAACT TTAGCAAAAA TTCTTAACGT ACCTTTCGCC
ATTGCAGATG CTACTGCATT GACAGAGGCT GGTTATGTTG GTGAAGATGT GGAAAATATT
CTGCTTAAGA TTATTCAGGC GGCAGATTAC GATATTGAAC GAGCACAATA CGGCATTATC
TATATTGATG AGATTGATAA GATAACACGT AAGTCAGAAA ATACATCGAT TACAAGAGAT
GTATCTGGTG AAGGAGTTCA GCAAGCACTC TTAAAGATTT TGGAAGGATC CGTAGCTTCT
GTTCCACCAC AAGGTGGAAG AAAGCACCCT CATCAGGAAT TTATTCAAAT TGATACCACC
AATATATTGT TTATCTGTGG CGGTGCATTT GATGGTTTAG AGAAAATCGT GGAAGCCAGA
ATTGGACAGA AGTCCATCGG ATTTAATGCT GAAATTGCGC ATGGTCAAAA GGAAAATATC
GGTGATTTAT TCCGCCAGGT ATTACCTCAA GATTTAATAA AATTCGGTAT GATTCCAGAG
TTTGTGGGTC GTGTACCAGT GAATACAGCC CTTGATTTAT TAGATGAGCA AGCATTAGTA
CGAATCCTTA CAGAACCAAA GAATGCTATC ACAAAGCAAT ACCGAAAATT GTTTGAGTTA
GATGGTGTTG AACTTGTTTT TGAAGAGGAT GCATTGAAAG AAATTGCAAA GCGTTCCTTT
GAACGTAAAA CAGGTGCGCG AGGGCTTCGT GCAATTATGG AATCTGTTAT GATGGATTCT
ATGTTCAAGG TTCCAACGGA TACCAGTGTT CTTAAATGTA TTATTACAAA GGAGTCTGCT
GAAGGTAAGG AAGAGCCACG CTTGGTTACT GCCGAAAACG GACAGCAGCG TAAAATTGCT
CAAAAGAAGG TAGCAAAGAA AAGTAGTAAT GAAATAGCTT AG
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| Protein sequence | MANRTEDRKQ VRCSFCGKSQ EQVRKLLAGP GDVYICDECI ELCYEIVEEE FDDDVAESAS
GINLLKPKEI KEFLDQYVIG QEEAKKVLSV SVYNHYKRVL SEKDLDVELQ KSNILMIGPT
GSGKTYVAQT LAKILNVPFA IADATALTEA GYVGEDVENI LLKIIQAADY DIERAQYGII
YIDEIDKITR KSENTSITRD VSGEGVQQAL LKILEGSVAS VPPQGGRKHP HQEFIQIDTT
NILFICGGAF DGLEKIVEAR IGQKSIGFNA EIAHGQKENI GDLFRQVLPQ DLIKFGMIPE
FVGRVPVNTA LDLLDEQALV RILTEPKNAI TKQYRKLFEL DGVELVFEED ALKEIAKRSF
ERKTGARGLR AIMESVMMDS MFKVPTDTSV LKCIITKESA EGKEEPRLVT AENGQQRKIA
QKKVAKKSSN EIA
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