| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0335 |
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| Symbol | dnaE |
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| ID | 5742181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 418448 |
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| End bp | 422008 |
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| Gene Length | 3561 bp |
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| Protein Length | 1186 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641291425 |
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| Product | DNA polymerase III DnaE |
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| Protein accession | YP_001557461 |
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| Protein GI | 160878493 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTA CACATTTGCA TGTGCATACA GAGTTCAGTC TACTAGATGG CTCTGGTAAA
ATAAAGGAAA TGGCTGCCCA AGCGAAAAAA CTTGGGATGG ATGCACTAGC AATTACGGAT
CATGGAGTTA TGTATGGTGT TATTGATTTC TACCGTGCAT GTTTGGCAGA AGGAATAAAG
CCAATTATCG GTTGTGAAGT TTATGTTGCA CCAAACTCCA GATTTGATAA AGAAGGTAGT
GCGAGTGAGG AACGATATCA TCATCTTGTT TTATTAGCGG AGAATGATAT CGGTTATCAC
AACTTAATTA AAATTGTATC AAGGGGCTTC ACAGAAGGCT TTTATTATAA ACCAAGAGTA
GATCATGAAT TATTAAAGGA ATACAGCGAA GGTATCATAG CGCTGTCGGC ATGTCTTGCT
GGTGAAGTTG CAGTGATGCT TCGAAGAAAT TTCTTTGAAG AAGCGAAAGC ATCGGCCTTA
AAGTTGCAAG AGATTTTCGG TGCTGGGAAT TTCTTTTTGG AATTGCAAGA CCATGGTTAT
CCGGAGCAAA AGTCAGTGAA TCAAGGTTTA CTAAGAATAA GTGAAGAAAC CAATATTCCA
CTGGTTGCTA CCAATGATAT TCACTACACC TATGACACTG ATGAAACTGC CCATGATATT
TTACTTTGTA TCCAAACACA GAAGAAAGTA ACGGATGAAG ATCGTATGCG TTATGCGGGT
GGTCAATTTT ACATGAAATC TCCAGAGGAG ATGAGAGAGT TATTTCCATA TGCTCTGCAG
GCGCTTCAAA ATACAGAGGA GATAGCAAAG CGTTGTAATG TAACAATTGA ATTTGGTCAT
TATAAACTTC CGAAATATGA TGTCCCAGCG CCTTATACAG TAAGCCCTGG AAGTGGAAGC
ACTGATGATG AGGGCGACAT CAGTGCAAGC CAAAATATCA GTACAAACAC TGATATTTTG
GCCAGAGAGT ATTTAAGAAA GCTCTGTGAA GAGGGATTGG TACGTCGCTA TAAGGACCCA
TCAACGGAAC TTTGGGATAG ATTAAACTAT GAGCTTGAAA CAATAGAGAA CATGGGATTT
GTCGATTATT TCTTAATTGT TTGGGACTTT ATTAAATATG CAAAAGACAA TGATATTATT
GTAGGTCCTG GTCGTGGTAG TGCTGCGGGA AGTGTTGTCT CTTACTGTTT GGAGATTACA
AATATTGACC CAATCAAATA TAGCCTCTTG TTTGAGCGAT TTCTAAATCC AGAGCGTCTT
ACGATGCCAG ATATTGATAT CGATTTTTGT TTCGAGCGTC GTCAGGAAGT GATAGATTAT
GTGGTATCGA AGTATGGAAA GGATCGAGTA GTTCAGATTG TTACCTTTGG AACAATGGCA
GCAAGAGCGG TAATCCGTGA CGTGGGTCGT GCACTTGATA TGCCGTACGC TTCAGTTGAT
GTGGTTGCAA AGATGATTCC AACAGAACTT GGGATTACCA TTGAAAAAGC ACTTAATATT
AATCCGGATT TAAAGAAGCT CTATGAATCT GATCCAGAAG TAATGCATTT AATAGATATG
TCAAAGCGTT TAGAGGGTTT ACCACGCCAT ACCTCCATGC ACGCTGCAGG CGTTGTTATC
AGTAATGCTC CGGCAGATGA ATATGTTCCA TTATCTAGGT CATCAGATGA TTCCATTACA
ACTCAGTTTA CGATGACTAC CTTAGAGGAA CTTGGATTAC TCAAAATGGA CTTTTTAGGA
CTTCGTACCT TAACAGTAAT TCAAAATGCA GTTTTGCTTG TGAACCAAGC GAAAGCTAGA
CTCGGAGAGA CCGAAGAGAA TTTTCTTAAC ATTGATGAAA TTGATTATAA TGACTCAAAA
GTATTGGATT TAATTTCTTC TGCAAAGACA GAGGGTATTT TTCAGCTAGA AAGCTCAGGA
ATGAAGAGTT TCATGAAGGA ATTAAAACCT CAGAACCTAG AAGATATTAT CGCCGGTATC
TCTTTATACC GTCCTGGTCC AATGGACTTT ATACCAAAAT ACATTCAAGG AAAAAATAAT
CAAAAAAGTA TTCAGTATGA ATGTAAGGAA CTAGAACCAA TCTTATCACC AACTTATGGT
TGTATCGTAT ATCAGGAGCA GGTTATGCAG ATCGTTCGAG AGCTTGCAGG ATATAGCTTT
GGACGAAGTG ACTTGGTGCG CCGTGCAATG TCGAAAAAGA AAGCATCCGT AATGGAGAAA
GAGAGACAAA GCTTCGTATA TGGAAATGTT GAAGAAGGGG TACCTGGTTG TATATCCAAA
GGTATTCCAG AAGCCGTTGC CAATCACATC TACGATGAGA TGACAGACTT TGCAAAATAT
GCTTTTAATA AATCTCATGC GGCTGCATAT GCGGTAGTAT CTTATCAAAC AGCATATCTA
AAATGTTACT ATCCGGTAGA GTTCATGGCA GCACTAATGA CTTCCGTGAT TGATAATCCA
AGTAAGGTGG CAGAATATAT CTATACTTGC CGCCAGATGG GAATAAAACT TCTACCACCG
GATATTAATG ATGGATATGC TACCTTTACG GTAAGTGGTG AAAATATTCG ATATGGACTC
TCTGCAATTA AAGGGCTTGG AAGACCAGTG ATTGATGCCT TGGTAATTGA GAGAGAAGAA
AATGGTCCAT ATCTTAACTT AAAGGATTTC GCGTCAAGAC TTTCTGGAAA AGAAGTGAAT
AAACGAACCA TTGAAAGTTT CATCAAATCA GGCGCTTTTG ACAGCATGCC AGGAACAAGA
AAGCAATTAA TGCATGTCTA TGTCGGGGTA CTAGATGGAG TAAGCCAAGA AAAGAAAAGA
GCGATGACGG GGCAGATGAG CCTGTTTGAT CTTGATGGTG ATGCGAAGGT TATGAATGAG
GAGATTATTT TCCCAGAGGT AGGGGAATAT TCGAAAGAAG AGTTACTTGC ATTTGAGAAG
GAAGTACTTG GAATCTATGT TAGCGGTCAC CCATTAGAGG CCTATGAACT ACTGTTAAAA
AGAAATGCAA CTGCGAATAC AGCGGATTTT ATCGTCGAAG AGGAGACGAA TACAGTAAAA
GTAGCAGATG GTGATACGGT TACTGTTGGT GGTATGATAA CCTCTCGAAC GTTAAAAACA
ACGAGAACGA ACGCTGTTAT GGCATTCATT ACATTGGAAG ATATGTTTGG TACGATGGAA
GTCATCATCT TCCCACGTGA TTACGAGAAG TTTAAATACA CATTGGAAAT TGATAATCGA
GTATTTATCA AAGGAAAAGT GGCAGTAGAA GAGGATAAAC CGGCAAAATT AATCTGTCAA
TCGATAACTC CTTTTGCGGA TATTAGTAAA GAGTTATGGG TAAAATTCTC GGATAAAGAA
GCATTTTTAA ATAACGAAAA GGCATTGTAT GAAATCATAA AGAATTATGA TGGCAATGAT
CGTATTACAG TATATTGTGA GAAGGAAAAA GCGATTAAAA AATTACCACT AAGTCAAAGT
GTTATTATCG AAGAGGGACT TCTTGAAAAC CTAAGAAATG CATTTTCTGA GGAGAATATA
AAAGTTGTTG AAAAGTTATA A
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| Protein sequence | MSFTHLHVHT EFSLLDGSGK IKEMAAQAKK LGMDALAITD HGVMYGVIDF YRACLAEGIK
PIIGCEVYVA PNSRFDKEGS ASEERYHHLV LLAENDIGYH NLIKIVSRGF TEGFYYKPRV
DHELLKEYSE GIIALSACLA GEVAVMLRRN FFEEAKASAL KLQEIFGAGN FFLELQDHGY
PEQKSVNQGL LRISEETNIP LVATNDIHYT YDTDETAHDI LLCIQTQKKV TDEDRMRYAG
GQFYMKSPEE MRELFPYALQ ALQNTEEIAK RCNVTIEFGH YKLPKYDVPA PYTVSPGSGS
TDDEGDISAS QNISTNTDIL AREYLRKLCE EGLVRRYKDP STELWDRLNY ELETIENMGF
VDYFLIVWDF IKYAKDNDII VGPGRGSAAG SVVSYCLEIT NIDPIKYSLL FERFLNPERL
TMPDIDIDFC FERRQEVIDY VVSKYGKDRV VQIVTFGTMA ARAVIRDVGR ALDMPYASVD
VVAKMIPTEL GITIEKALNI NPDLKKLYES DPEVMHLIDM SKRLEGLPRH TSMHAAGVVI
SNAPADEYVP LSRSSDDSIT TQFTMTTLEE LGLLKMDFLG LRTLTVIQNA VLLVNQAKAR
LGETEENFLN IDEIDYNDSK VLDLISSAKT EGIFQLESSG MKSFMKELKP QNLEDIIAGI
SLYRPGPMDF IPKYIQGKNN QKSIQYECKE LEPILSPTYG CIVYQEQVMQ IVRELAGYSF
GRSDLVRRAM SKKKASVMEK ERQSFVYGNV EEGVPGCISK GIPEAVANHI YDEMTDFAKY
AFNKSHAAAY AVVSYQTAYL KCYYPVEFMA ALMTSVIDNP SKVAEYIYTC RQMGIKLLPP
DINDGYATFT VSGENIRYGL SAIKGLGRPV IDALVIEREE NGPYLNLKDF ASRLSGKEVN
KRTIESFIKS GAFDSMPGTR KQLMHVYVGV LDGVSQEKKR AMTGQMSLFD LDGDAKVMNE
EIIFPEVGEY SKEELLAFEK EVLGIYVSGH PLEAYELLLK RNATANTADF IVEEETNTVK
VADGDTVTVG GMITSRTLKT TRTNAVMAFI TLEDMFGTME VIIFPRDYEK FKYTLEIDNR
VFIKGKVAVE EDKPAKLICQ SITPFADISK ELWVKFSDKE AFLNNEKALY EIIKNYDGND
RITVYCEKEK AIKKLPLSQS VIIEEGLLEN LRNAFSEENI KVVEKL
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