Gene Cphy_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0329 
Symbol 
ID5742175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp412380 
End bp413318 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content40% 
IMG OID641291419 
ProductROK family glucokinase 
Protein accessionYP_001557455 
Protein GI160878487 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID[TIGR00744] ROK family protein (putative glucokinase) 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAGT TTTGCTTTGG AATTGACATT GGTGGCACAA CAATTAAATG CGGATTATTT 
ACAGCGAATG GTGAATTAAA AGAAAAATGG GAGATTCCTT CTAGAACAGA AAATGGCGGA
ATTCAAGTAC CACAGGATGT AGCGGATACG ATTGATGCCA AATTAAAAGA ATTATCCATT
GAGAAAAAGG ATGTTCTTGG AGTTGGTATT GGTGTACCCG GTCCAATTAC CGAAGATGGA
ACTGTCTTAA AATGTGCTAA TCTAGGTTGG GATATTTTTA ATGTAAATGA AAAAATGAGT
GCACTTACCG GACTAAAGGT AGCAACTGCA AATGATGCCA ATGTTGCTGC TCTAGGAGAA
ATGTGGATGG GCGGTGGCAA AGGTTATAAG AACATCGTTA TGGTTACTCT TGGAACCGGC
GTAGGTGGCG GAGTTATTTT AAATGGTAAG ATTGTTGCAG GAAGTAATGG CGGTGGTGGT
GAAATCGGCC ATATGACAAT GAATCTTGAT GAGAAAGAGA CATGCGGTTG CGGTAAACAT
GGCCATTTAG AGCAATATGC TTCTGCTACA GGCATTGTAC GTCTTGCTAA AAAACGTTTA
TTAGATACAA GTGTTACTAC TTCACTTCGT GAGCTTGCCG AGGTAACAGC GAAAGATATT
TTTGATCACG CGAAAGCGGG AGATACGGTC GCACTAGAGC TTGTTGAAGA ACTAGGTAGA
TATCTTGGGT TGGCATTATC TCATGTTGCT GCTGCGGTTG ATCCACAGGT ATTTGTAATT
GGTGGTGGTG TATCAAGAGC TGGCTCTATG TTACTTGATG TGATTTCAAA ATATTATAAT
CAGAATATCA TATTCGCACT ATCAAATAAA GAGTTCCGTC TTGCTGAACT TGGAAATGAT
GCAGGGATCT ATGGTTGTGC AAAATTAGTG ATTGGCTAA
 
Protein sequence
MDKFCFGIDI GGTTIKCGLF TANGELKEKW EIPSRTENGG IQVPQDVADT IDAKLKELSI 
EKKDVLGVGI GVPGPITEDG TVLKCANLGW DIFNVNEKMS ALTGLKVATA NDANVAALGE
MWMGGGKGYK NIVMVTLGTG VGGGVILNGK IVAGSNGGGG EIGHMTMNLD EKETCGCGKH
GHLEQYASAT GIVRLAKKRL LDTSVTTSLR ELAEVTAKDI FDHAKAGDTV ALELVEELGR
YLGLALSHVA AAVDPQVFVI GGGVSRAGSM LLDVISKYYN QNIIFALSNK EFRLAELGND
AGIYGCAKLV IG