| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0260 |
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| Symbol | |
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| ID | 5744183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 322207 |
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| End bp | 325050 |
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| Gene Length | 2844 bp |
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| Protein Length | 947 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641291350 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_001557386 |
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| Protein GI | 160878418 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0669187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATA ATAAACACTT TATCAAAATC CGCGGTGCCA AAGAACATAA TCTTAAGGGA
ATCAGTGTGG ATATTCCAAG AGATGAATTC GTTGTTCTTA CGGGACTTAG CGGTTCAGGT
AAATCCTCTC TCGCATTTGA TACCATCTAT GCAGAGGGGC AAAGACGATA CATGGAATCA
TTATCGTCAT ATGCAAGACA GTTCCTTGGT CAGATGGAGA AACCGAATGT GGAAAGTATT
GAAGGGTTAT CTCCTGCAAT TTCCATTGAT CAAAAATCTA CGAATCGTAA CCCAAGATCT
ACGGTTGGAA CAGTAACGGA AATTTATGAT TATTTTCGTT TGCTCTATGC AAGAATCGGT
ATTCCGCATT GTCCTATCTG CGGAAAGGAA ATTAAGAAAC AGACCGTTGA CCAGATGGTA
GATGAGATTA TGAGATTACC AGAAGGTACG AAGTTACAGC TTCTTTCTCC CGTAGTACGT
GGAAGAAAGG GTGAGCATAC AAAGATATTT GAGCAGGCAA AAAAGAGCGG TTATGTACGT
GTGATGGTAG ATGGAAATCT ATATGAACTA ACCGAAGAGA TAAAACTGGA AAAGAATAAA
AAGCATAATA TTGAAATAAT GGTAGACCGT ATCGTTGTAA AAGCTGGTAT TGAAAAGCGA
CTGACAGATT CCGTAGAGAG TGTGCTCAAA TTAAGTGATG GGCTTCTTAT AGTTGACGTT
ATTGGAGGAG AACAGTTAAC ATTCTCTCAA AGCTTTTCTT GTCCAGACTG TGGTATTAGT
ATGGAAGAGA TGGAGCCAAG AACCTTCTCC TTTAATAATC CATTTGGAGC GTGTCCGGAG
TGCCATGGTA TTGGTATTAA GATGGAGTTT GCAGAAGAAT TACTAATCCC GGATACTTCA
CAAAGTATTG ATGAAGGTGC GATTGCTGCT ATGGGCTGGG CATCCGTAAC GGATAAAGGA
AGTTATACAA GAGCTACGAT GGAAGCGTTG TCAAAAGAGT ATGATTTTAG TCTAAGCACT
CCTTATCGTG ACTATCCGGA TAAAGTTAAA TATATTATTA TGCATGGTAC AGATGGAAAA
ACTGTCAAAG TTCATTATCA AGGGCAACGT GGTGTTGGTG TCTATGATGT GGCATTTGAA
GGTTTAATTC GAAATATGGA GCGCAGATAC CGCGAAACTG GTTCAGAGAC ACAGCGTGCG
GAATATGAGA CATTTATGAA TACGACTCCA TGTAAGGCAT GTAAAGGAAA GAGACTGAAA
CGAGAGGCTC TTGCTGTTAC TGTTGGTGAT AGGAATATTG CAGAGGTAAC TGAAATTTCT
ATTCGTGAAC TTCATGAATT CATGAATCAA CTTACTTTAA CTTCAATGCA ATTAAAGATT
GGTGAGCTGG TATTAAAAGA AATTCGTGCT AGAATTGGCT TCTTAATGGA TGTAGGTCTT
GATTATTTAA CACTTGCCAG AGCAACCGGA ACATTATCCG GTGGAGAAGC ACAGAGAATT
CGTCTGGCAA CTCAGATAGG TTCAGGATTA GTTGGTGTTG CCTATATTTT GGACGAGCCA
AGTATTGGCT TGCATCAAAG AGATAATGAT AAACTCTTAA AGACTCTAAA GCATCTGAAA
GAGCTTGGGA ATACGCTGAT TGTAGTTGAG CATGATGAAG ACACAATGTT TGCAGCAGAT
TGTATTGTAG ATATTGGTCC TGGTGCAGGT GAGCATGGTG GTGAAGTTGT CGCTGTTGGT
ACAGCACAGG AAATCATGGA CAACCCAAAC TCTATTACTG GTGCTTACTT AAGTGGAAGA
ATTAAGATTC CAGTACCAAA GGTAAGAAAA GAGCCAACAG GGTTCTTAAC TATTAAGGGA
GCAAAAGAGA ATAATCTTCG TAATGTCAAT GTAGATATTC CTCTTGGTGT GATGACCTGT
GTAACAGGGG TATCGGGATC TGGTAAGAGT TCCTTGGTAA CACAGATTTT ATATAAACGT
TTAGCAAGAG ATTTAAATCG AGCTCGTTGT ATTCCTGGAA AACATGACGA TATGATTGGT
ATTGATAAGC TTGATAAAGT CATAAACATT GACCAGTCAC CAATCGGACG TACTCCTAGA
TCTAACCCTG CTACTTATAC TGGTGTTTTT GATCAAATCC GTGATTTATT TGCAGCAACA
CCAGACGCAA AGATGAAGGG ATACAGTAAG GGACGCTTTA GTTTTAATGT TAAAGGCGGA
CGTTGTGAAG CTTGTAGCGG TGATGGTATC ATTAAGATAG AGATGAACTT CCTACCAGAT
ATCTATGTTC CTTGTGAGGT GTGTGGTGGA AAACGTTATA ATCGTGAGAC ATTAGAGGTT
CGATATAAAG GTAAGAGTAT TTATGATATT CTTGATATGA CGATAGAAGA AGCAGTGAAG
TTCTTTGAGA ATGTACCTTC CATTAAGAGA AAGATTGAAA CCCTTAATGA TGTTGGACTT
TCTTACTTAA AGCTTGGTCA TCCATCGACT TCTCTTTCTG GTGGTGAAGC ACAGCGTATT
AAGTTAGCCA CAGAGTTAAG TAAGCGTAGT ACTGGAAAGA CAATCTATAT CTTAGATGAG
CCAACAACAG GTCTTCATTT TGCAGATGTT CACAAGTTGG TAGAGATCTT ACAAAGACTC
TCGGAAGGTG GTAATACGGT CGTAGTCATA GAGCATAACC TCGAAGTGAT TAAGACTGCG
GACTATATTA TTGATATTGG ACCAGAAGGT GGAGACAAAG GTGGTACTGT AATTGCGAAG
GGTACTCCGG AAGAGATTGC GAAAGTGAAA GAATCTTACA CGGGTTATTA TCTTAAAAAA
TATCTGGAAG AGGTAAGGGA ATAA
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| Protein sequence | MADNKHFIKI RGAKEHNLKG ISVDIPRDEF VVLTGLSGSG KSSLAFDTIY AEGQRRYMES
LSSYARQFLG QMEKPNVESI EGLSPAISID QKSTNRNPRS TVGTVTEIYD YFRLLYARIG
IPHCPICGKE IKKQTVDQMV DEIMRLPEGT KLQLLSPVVR GRKGEHTKIF EQAKKSGYVR
VMVDGNLYEL TEEIKLEKNK KHNIEIMVDR IVVKAGIEKR LTDSVESVLK LSDGLLIVDV
IGGEQLTFSQ SFSCPDCGIS MEEMEPRTFS FNNPFGACPE CHGIGIKMEF AEELLIPDTS
QSIDEGAIAA MGWASVTDKG SYTRATMEAL SKEYDFSLST PYRDYPDKVK YIIMHGTDGK
TVKVHYQGQR GVGVYDVAFE GLIRNMERRY RETGSETQRA EYETFMNTTP CKACKGKRLK
REALAVTVGD RNIAEVTEIS IRELHEFMNQ LTLTSMQLKI GELVLKEIRA RIGFLMDVGL
DYLTLARATG TLSGGEAQRI RLATQIGSGL VGVAYILDEP SIGLHQRDND KLLKTLKHLK
ELGNTLIVVE HDEDTMFAAD CIVDIGPGAG EHGGEVVAVG TAQEIMDNPN SITGAYLSGR
IKIPVPKVRK EPTGFLTIKG AKENNLRNVN VDIPLGVMTC VTGVSGSGKS SLVTQILYKR
LARDLNRARC IPGKHDDMIG IDKLDKVINI DQSPIGRTPR SNPATYTGVF DQIRDLFAAT
PDAKMKGYSK GRFSFNVKGG RCEACSGDGI IKIEMNFLPD IYVPCEVCGG KRYNRETLEV
RYKGKSIYDI LDMTIEEAVK FFENVPSIKR KIETLNDVGL SYLKLGHPST SLSGGEAQRI
KLATELSKRS TGKTIYILDE PTTGLHFADV HKLVEILQRL SEGGNTVVVI EHNLEVIKTA
DYIIDIGPEG GDKGGTVIAK GTPEEIAKVK ESYTGYYLKK YLEEVRE
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