| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0259 |
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| Symbol | |
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| ID | 5744182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 320208 |
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| End bp | 322196 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641291349 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_001557385 |
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| Protein GI | 160878417 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000897839 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCATT TTAAATTAGT GTCGGAATTT GCACCGACTG GAGATCAGCC TGAGGCGCTA
GAGGCCTTGG TGAAGGGGTT TGAAGAGGGT AACCAATTTG AAACCTTACT AGGTGTTACT
GGTTCTGGTA AGACCTTTAC GATGGCGAAT GTCATACAAA GGTTGAATCG TCCTACGTTA
ATCATTGCAC ATAATAAAAC GTTAGCAGCA CAGTTGTATG GTGAGTTTAA AGAATTCTTT
CCAGAGAATG CGGTAGAATA CTTTGTTTCT TATTACGATT ATTATCAACC GGAGGCTTAT
GTGCCATCAA CGGATACTTA TATAGAAAAA GACTCTGCTA TTAATGATGA GATTGATAAA
CTGCGTCACT CGGCGACTGC AGCATTGACA GAACGACGTG ATGTTATTAT AGTGGCATCC
GTGTCTTGTA TCTATGGACT TGGTAGCCCG GTTGACTATC AGAACATGAC ACTTTCCCTT
CGTCCTGGTA TGATAAGGGA CCGCGATGAT GTGCTTCGCC GTCTTGTTGA GATTCAATAT
ACAAGAAATG ATATGGACTT TAAACGTGGT ACTTTCCGCG TTCGAGGTGA TGTTGTTGAG
ATATTTCCGA TTACTGGAAC AGATTTGGCA TACCGAGTTG AATTCTTTGG TGATGAGGTA
GAACGTATTA CAGAGATTGA TGTTTTAACC GGAGAGATTA AGTGTACGTT AGAGCATATG
GTTATCTTTC CAGCATCTCA TTATGTTGTA TCCAAAGACA ACCTTGAGAG GGCGATTGTT
AATATTGAAG AAGAGTTAGA GGATCGAATT CGGTACTTTA AGAGTGAGGA CAAGCTATTA
GAGGCACAGA GAATTTCAGA GCGTACCCAT TTTGACATTG AGATGCTCCG AGAAACTGGT
TTTTGTTCTG GAGTAGAAAA CTATTCGATG CATCTTGCTG GTTTAACACC AGAGAGTACA
CCACATACTC TAATTGACTA TTTTCCAGAT GATTTTCTGA TTATGGTAGA TGAGTCCCAT
ATTACAATTC CACAGGTACG AGGAATGTAT GCAGGTGACC AGTCAAGAAA GACTACCTTA
GTTGATTTTG GTTTCCGTCT TCCATCTGCA AAGAGTAACC GACCATTAAA CTTTACGGAA
TTTGAAAGTA AAATTAATCA GATGCTATTT GTTTCTGCTA CACCGAATGT ATATGAGAAA
GATCATGAGC TACTTCGTGC AGAGCAGATT ATACGTCCAA CAGGTCTCCT TGATCCTGTT
GTTGAGGTTA GACCGGTACA TGGGCAGATT GATGATTTAG TTTCTGAAGT GAATAAGGAA
ACTGCGAAGA AGAATAAGGT CATGATTACT ACGCTGACTA AGAGAATGGC AGAAGATTTA
ACGGATTATA TGAGAGAGTT AGGTATTCGT ATTAAGTATC TACACTCTGA TATTGATACC
TTAGAACGTT CTGAAATTAT CCGCGATATG CGTATGGATG TATTTGATGT ATTGGTTGGA
ATTAACTTAT TGCGTGAGGG TCTTGATATC CCAGAGATCA GCTTAGTTGC GATTCTTGAT
GCGGATAAAG AAGGATTCTT ACGTTCTGAA ACATCGTTGA TCCAGACGAT TGGACGTGCT
GCCCGTAATG CAGAGGGTCG GGTTATTATG TATGCAGACA GAATCACCGA TTCAATGGAT
AAGGCACTGA GGGAGACAGA ACGTCGTCGT AAGATTCAGG ACGAATACAA TGAGAAACAT
GGTATTACGC CACAGACAAT TAAGAAAAAA GTACGTGAAC TTATCAGCAT TTCCAAGAAA
GTAAGTAAGG AAATGTATGA TATGAATATA AAAGACTACG AATCTATGAG CCGCAAGGAA
TTAGAGGCTG TGGCGAAGAA ATTAACAAAA GAAATGCATA CGGCAGCAGC GGAATTGAAT
TTCGAGCTTG CTGCAGAGCT TCGTGATAAA TTGCTAGAAT TAAAAAAGCA AATTAATGAG
TTAGAATAG
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| Protein sequence | MDHFKLVSEF APTGDQPEAL EALVKGFEEG NQFETLLGVT GSGKTFTMAN VIQRLNRPTL
IIAHNKTLAA QLYGEFKEFF PENAVEYFVS YYDYYQPEAY VPSTDTYIEK DSAINDEIDK
LRHSATAALT ERRDVIIVAS VSCIYGLGSP VDYQNMTLSL RPGMIRDRDD VLRRLVEIQY
TRNDMDFKRG TFRVRGDVVE IFPITGTDLA YRVEFFGDEV ERITEIDVLT GEIKCTLEHM
VIFPASHYVV SKDNLERAIV NIEEELEDRI RYFKSEDKLL EAQRISERTH FDIEMLRETG
FCSGVENYSM HLAGLTPEST PHTLIDYFPD DFLIMVDESH ITIPQVRGMY AGDQSRKTTL
VDFGFRLPSA KSNRPLNFTE FESKINQMLF VSATPNVYEK DHELLRAEQI IRPTGLLDPV
VEVRPVHGQI DDLVSEVNKE TAKKNKVMIT TLTKRMAEDL TDYMRELGIR IKYLHSDIDT
LERSEIIRDM RMDVFDVLVG INLLREGLDI PEISLVAILD ADKEGFLRSE TSLIQTIGRA
ARNAEGRVIM YADRITDSMD KALRETERRR KIQDEYNEKH GITPQTIKKK VRELISISKK
VSKEMYDMNI KDYESMSRKE LEAVAKKLTK EMHTAAAELN FELAAELRDK LLELKKQINE
LE
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