| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0252 |
|---|
| Symbol | |
|---|
| ID | 5745120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 311051 |
|---|
| End bp | 312250 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641291342 |
|---|
| Product | abortive infection protein |
|---|
| Protein accession | YP_001557378 |
|---|
| Protein GI | 160878410 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1266] Predicted metal-dependent membrane protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000621218 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTACG TTAGAAAAAT AAATATAGTA TTTTTATTTA CCATAACTAC TATATTTATA
TCAAACTTTA TACCTTTTAG AGACTTCGTA TCAAATGAAG CATTTTTACT ATTAATATCT
CAAGCAATCA TAGCAGGACC TTCTATTGTA TTTTTAATCG TAGAAAGTAG GAGACAAAAG
AGATTCTCAG ATGGGTTGGA GATAAATTAT TATTCTATGG GATATGGAAC CGGGGAAGAT
AAAAAAAGCA TTCGCGAGCA ACTTTGTTTT CACAAGGTAT CGTTATCAAA TGTGATATGG
CTTATATTAT TTACTATCTG TATTACACCA GCAATCAACT TTGTGAATGC CATATCACGT
ATGTTTTCAG TGGCAGCAAT TAATGATACG ATGTTAAATA TAACTCAAAA AAATACTTAT
TTGTTTGCAC TATTTTGTGT AGCTTTCGTA CCTTGTGTAA TGGAAGAGAT CGTATATCGA
GGTTTATTTT ATCAGGGATA TCGAAGAGTG AATCCACTTG GAGCTGCATT TTTATCAGCC
TTCTTATTTG GTATCTTGCA TGGTAACTTG AATCAGTTCT GCTATGCTTT TGTTATGGGA
ATTGTATTTG CATTTGTAAT AGAAGCAACA GATTCTATTC TTTCGACGAT GATAATTCAC
TTTATCATGA ATGGTTGGTC GATTACCTTA GTTTATGCTA TTCCAAGACT AATTGAATAT
TTAAGGAATA TGGCAAATGA TGCGATAGCA CGTGGTGACC AAGGATTAGC AGATTCTATT
ACGAAATTGA TAGGTACGGA TCAAGTTGAT TTTAAGCAAG TACTTCAAGA GAGTGGTAAT
GCAGTGTTAT CGGATACGAA TTTCATTGAT ATCTTAAGAA CTTATGGTCT TACCGCTTTA
TTAGGTGGAG TATTAGCTTT TTTGATTTAT CGTAAGATTG CAAAGAATAC TGGAAGATAT
GAATATATTA AAAGTCTATT TTCAAAGAAT AAGGAGTATA GATTAGAAGG AAATCATTCT
ATTCCTGGCG ATGAGTATAA AGGCGAAGGA AATCACTATA TTTCTAGTGA TGAGTATAAA
GGCGAAGGGA AAGTAAAAGC TAGAGCCTTA TTTACTCTCC CTCTTTTGAT TGCAATCGCA
ATCTGTGTCT TTTTCTTAGT AATAAATGAA CTCACCCTTC AGGGAATCAT TAGCATGTAA
|
|---|
| Protein sequence | MNYVRKINIV FLFTITTIFI SNFIPFRDFV SNEAFLLLIS QAIIAGPSIV FLIVESRRQK
RFSDGLEINY YSMGYGTGED KKSIREQLCF HKVSLSNVIW LILFTICITP AINFVNAISR
MFSVAAINDT MLNITQKNTY LFALFCVAFV PCVMEEIVYR GLFYQGYRRV NPLGAAFLSA
FLFGILHGNL NQFCYAFVMG IVFAFVIEAT DSILSTMIIH FIMNGWSITL VYAIPRLIEY
LRNMANDAIA RGDQGLADSI TKLIGTDQVD FKQVLQESGN AVLSDTNFID ILRTYGLTAL
LGGVLAFLIY RKIAKNTGRY EYIKSLFSKN KEYRLEGNHS IPGDEYKGEG NHYISSDEYK
GEGKVKARAL FTLPLLIAIA ICVFFLVINE LTLQGIISM
|
|---|
| |