Gene Cphy_0243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0243 
Symbol 
ID5745111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp301931 
End bp302704 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content37% 
IMG OID641291333 
Productflagellar basal body rod protein 
Protein accessionYP_001557369 
Protein GI160878401 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.146878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAGAG GTCTATATAC TGGTTGGACT GGTATGGAAA ATGAACAAAA GCGTCTAGAT 
ATCATATCAA ACAATTTAGC GAATTCCGCT ACTGTTGGAT ATAAAAAGGA AGGCGTCACA
AATCAATCCT TCGATGATGT TCTAACGTTA AAAATTCGAG ATGAATCCGA GAATTTTACT
GATAAGAGAA TTGGTAAAAT GACACTTGGA GTGAAGCTTG GTGAAGTTTA TACTGATTAT
ACACAGGGTT CTTTAAGAGA AACTGGGAAT ACATTTGATT TCGCAATTGA AGGTTCTGGA
TTTTTTAAGA TGGAAGTGTT AGATAAGGAT GGTAATTCAA AAGAACGCTA TACCAGAGCC
GGACAGTTTT TAATGGACAA AGAGGGTTAT GTTGTAGATG TGAATGGAAA TCACCTCATG
AGTGAAGGGG GTTACCTTCA GGTGCCAACA GATGCCAGCC AAATCGTCAT TGATTTACAG
GGTAACGTGT TTGCAGATGG CGCACAGGTG GACAAGTTAG TCGTAACAGA TTTTGAGAAT
TATGATTATC TAAAAAAATT TGGCGAGTCT ATGTATGAAG CAGTAGACGG TGCTAGAGTA
AAAGATACAG CTGCTGGTAT CCGTCAAGGA TACACAGAGC AGTCTAATGT CAATGTTGTT
AGTGAAATGG TAAATATGAT TGCAATTACA AGAGCTTATG AAGCAAATCA GAAAGTACTT
CAATCCATAG ACGGTACATT AGAATTAGCT GCAAACTCAA TAGGTAAAAT CTAA
 
Protein sequence
MVRGLYTGWT GMENEQKRLD IISNNLANSA TVGYKKEGVT NQSFDDVLTL KIRDESENFT 
DKRIGKMTLG VKLGEVYTDY TQGSLRETGN TFDFAIEGSG FFKMEVLDKD GNSKERYTRA
GQFLMDKEGY VVDVNGNHLM SEGGYLQVPT DASQIVIDLQ GNVFADGAQV DKLVVTDFEN
YDYLKKFGES MYEAVDGARV KDTAAGIRQG YTEQSNVNVV SEMVNMIAIT RAYEANQKVL
QSIDGTLELA ANSIGKI