Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0192 |
Symbol | |
ID | 5745060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 238298 |
End bp | 240091 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641291282 |
Product | ABC transporter related |
Protein accession | YP_001557318 |
Protein GI | 160878350 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000020543 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACAAG TAAATCATGT GACAAAAAAA TATGGAAATG CCATTATATT AGAAAACAGT AGCTATACCT TTCCTTCCAA AGGTATCGTG TGCCTAATGG GTGCGTCTGG TGGTGGTAAA ACCACCCTGC TTAACCTTCT TGCTGGATTC GATACTGATT ACGAAGGAGA AATCCTGGTA GGAGGCACAT TAATTAGCGG AATGGACGCT GAAAAGCTCT GTCAGTATCG CCGGGATAAC ATCGGCTTTG TGTTCCAAAA TTATCACCTG CTTCCAGGTT ATACCGCATC GGAAAATGTG CTACTTGCAT CCGCACTGTC GAAAGATTCT CCAGATGCTA GCCGACAAAA AGCCGCAACA CTTTTAACGC GACTAGGAAT TGGAGAAAAG GAAAATCAAA AAGTGGAAAA CCTCTCTGGC GGGCAAAAGC AACGTGTTGC GATCGCCAGG GCCTTGATGA GTGACCCGCA AATCATATTC GCTGATGAGC CTACCGGTGC TCTTGACCGC ACGACCTCAA CAGAAATTAT GAAGCTGCTG CAAGAAATAT CTAGGGACAG ACTTGTTGTG GTAATTACTC ACGATGCAAA AATTTGCGAA TTTGCCGATG AGATCATTCA CATTAAGGAG AAAAAAATCA TAGAGGAGCG GGTAATAAGA CGCGATGTGA CAGACGAAAA AGCGTTGGTA GTCGGTTCGT CGCCTAAGAT TTCTATATTC TCTCGCGCTG TGAAAAACTT TAAGGTGCAC TTAACGCGTT ATGCTGCGGT ATCTCTCTCT ATCTCCATTG GCTTACTTGC CTTCCTGTTT TCTCTATCCT TTGGCAATGT GATGGAACGC TCTATCGACG ACTTTAAGAC CAAGAACACC GCCTTTAATA ATGGCTATAT CAAGGGTGCG GACGATGGTA CAATACTCGA ATATCTTAAG AAGGACGAAC GCATCGAAAA CGTGTATTAT CAGTATAAGC TTCGTAATCT CACTTTATCG ACAGGTGATA AATCAGAGCA GATAGCGGAG AAGTTTCCGA CGCCAAAAGC GACCGAGAGC TTATCTTATG GTGTGATGCC TCGTCTCGGA CAAAATGAGA TTGCAATCAC ACCAAGCCTT GCTAAGAAAT TTGATTCAGA CATTAAGAAA CTTCTAGGAA AAGAGTTTAT ATTAGAACTG GATGGACAAA AACATAAGCT TACTATGAGT GGAATCTATA ACGCTGGCTA TGATGATTTT ATTGTCAGCT CTGATATTGA GCAACAATTT TATAAAAATA TTACGGATGA AAAAAACTAT TCTATTAGCT ATGATGTCAA GGAATTTTCC GATATCGTAG GGGTTAGCAA CGTCCTAAAG TTACGGGGAA TCACTGCCAA AACGGCCTCT GACGAGGTGT ACGCGCTACA AAACACGTTT CACAGTCTTA ATAAATTATT TCTTGTGATT TCCTTTTTGA TTTTGGCAAT TAGTTTGTTC ATCTGCACTA TTTTGCTGAA CAAGCTACAA AACACTCGTT ATCACGAAAT AGGACTGTTG TCAGCTCTTG GGTTTAGCAG ACAGCAAATC AGCTCGATGA TTCGATGTGA AAATTTGTTG CTGTCCTCCC TCGCCACAGT AGTAAACCTC ATTCTCCTTT TCGCCAGCAT ATTACTTGGT AAACTGCTTG ATTTCGCGCT GATTTTTACA GGAGCGCAGG TCGTTTTATC CATAGTGGCT ACCTTTGCCA TTGTTATGCT TCTAAGTGCT GTAGCGAGCT ATAAGTTAAT ACGTACCGAG CCAGCGATAG CACTGAAAAA GTGA
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Protein sequence | MLQVNHVTKK YGNAIILENS SYTFPSKGIV CLMGASGGGK TTLLNLLAGF DTDYEGEILV GGTLISGMDA EKLCQYRRDN IGFVFQNYHL LPGYTASENV LLASALSKDS PDASRQKAAT LLTRLGIGEK ENQKVENLSG GQKQRVAIAR ALMSDPQIIF ADEPTGALDR TTSTEIMKLL QEISRDRLVV VITHDAKICE FADEIIHIKE KKIIEERVIR RDVTDEKALV VGSSPKISIF SRAVKNFKVH LTRYAAVSLS ISIGLLAFLF SLSFGNVMER SIDDFKTKNT AFNNGYIKGA DDGTILEYLK KDERIENVYY QYKLRNLTLS TGDKSEQIAE KFPTPKATES LSYGVMPRLG QNEIAITPSL AKKFDSDIKK LLGKEFILEL DGQKHKLTMS GIYNAGYDDF IVSSDIEQQF YKNITDEKNY SISYDVKEFS DIVGVSNVLK LRGITAKTAS DEVYALQNTF HSLNKLFLVI SFLILAISLF ICTILLNKLQ NTRYHEIGLL SALGFSRQQI SSMIRCENLL LSSLATVVNL ILLFASILLG KLLDFALIFT GAQVVLSIVA TFAIVMLLSA VASYKLIRTE PAIALKK
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