| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0173 |
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| Symbol | |
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| ID | 5745041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 218439 |
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| End bp | 219458 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 641291263 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001557299 |
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| Protein GI | 160878331 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACAAA AACATAATGG AGTAAGACGT ATTCATCAAG ATAACATGAG GGAAAACAAT
CAGTCGAGAA CTTCCATTCT TTTCGCTATT GCTCTATTGA TTTATATTGT TCTTAGTATT
TATCAATTAC AAATTAGGAA TCAGTTAGTC AAACAGATAC TGTTACATTT CCAGGTTATT
CTTACAGTTT CATTTGTGAT TAGTGAGATA AAGCATAGTT ACTTGATTTC TATTCTGGTA
ACTCTTTTTT GCTTTCTTTT GTCTTTTCTA TCGTTCTTTA CAGATGAGAA TGAGCAAGCG
ATTCATGCAA TGATAATATA TGGGACTACG ATAGTGATAA TAAGTTTAAT ACACAAATAT
AGAGTAAAGC TTACAGGTAA TCTGGAACAT GCTATTAGAC ATAATAAAAA ATCTGATGAA
TTGATTAAAG AATTACGAAA GAAGAACAAA CAGCTGTCAA AGTTAAACAA GGATATGAGA
GAAAAAGAGA AGCAATTAAA TCAGTTGGCA TTTTACGATA TTTTGACGAA GGTTGCAAAT
CGGAAAATGC TAATTAATCA AATGGATTTC TTAATCAGCA TATCAAAAAA CTTTTCAGTT
GTATTTATTG ATCTCGATAA TTTTAAGAAA ATAAATGATA CGATGGGGCA TCAGGCGGGA
GATTCCTTAT TAAAAGCAGT CACGTTACGA ATTGGTGATT ATATTCATCC CAAAGATATG
TTTGGTCGAT TAGGTGGAGA TGAATTTGTA TTAATCGTAC AAAGGGAGTT AGGAAATGAG
GAAATACTGT CCTATGTCGA AGGGTTAAGG CAACAACTTA TTAGACCTTT TAGAATAAAA
AAGGCCGAAC TTACTATCAC TGCAAGTTTT GGTATTTCAG CTTTCCCAAA GGATGGTAGA
ACATCTTCCG AGTTGCTAAA GTTTTCTGAT ATTGCTATGT ATCAGGTCAA AAGTATGGGG
AAAAACGATG TCGAGTTTTT TACTATGAGT ATGAAAAGGA AGAAGATAAA AAAATTATAA
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| Protein sequence | MKQKHNGVRR IHQDNMRENN QSRTSILFAI ALLIYIVLSI YQLQIRNQLV KQILLHFQVI
LTVSFVISEI KHSYLISILV TLFCFLLSFL SFFTDENEQA IHAMIIYGTT IVIISLIHKY
RVKLTGNLEH AIRHNKKSDE LIKELRKKNK QLSKLNKDMR EKEKQLNQLA FYDILTKVAN
RKMLINQMDF LISISKNFSV VFIDLDNFKK INDTMGHQAG DSLLKAVTLR IGDYIHPKDM
FGRLGGDEFV LIVQRELGNE EILSYVEGLR QQLIRPFRIK KAELTITASF GISAFPKDGR
TSSELLKFSD IAMYQVKSMG KNDVEFFTMS MKRKKIKKL
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