Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0172 |
Symbol | |
ID | 5745040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 217242 |
End bp | 218183 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641291262 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001557298 |
Protein GI | 160878330 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTTA TAGGAAGCAT CATTAGAGAA TATCGTTGTA AGTTAAAAAT GAGCAGAACG ATGTTAGCAG AAAATATCTG CTCGGAAAAA TATATATATT TAATTGAAAA AGGAGAGCGT ACCCCATCTG CTGATATGGT GCGATTATTA AGCGATAGGA TGGGGGTAGA CTTATTTGAC CATTATCAGT ACCTTGACTG TAGTAATCCA ATCTCCGTAC GAGAAACACT AAAGAATTTT GATATCTGTC AGAGAAAATC AGATTTCATA ACTGCGAAGA GTATAGTGGA TAAGGCTATG TATCTTGCGG ATTTTAAGAA TAAGCCATGG CTATATGAGC TTGAAGCAAA TAGGCTTGGT TATATGGTTT TTATAGAAAA TAAGTATGAG GAGGCAATTA TGGATGCCAA CAAAGTACTA GAAGACATGG AACCTAAATA TTTAAGTAGT ATTCATGTGG TAAATCTATA TGTATTACTA TCCACTTGTT ATCAAATTAT AGGTGACCTC AATAACGCTA AGTCTATAAC TTTAGCAGCT TATAATATTG TGCGATCGAA ATATAAGATT GAAAAGTATG ATCATAACAT TGTCTCAGTC AGATTAAATT TAATAACCTT ATATTATTTA ACGAAAGATT ATGAAAAAGC AATAACGGAA GGTAAGGAGT TAATAGATTA TCAGATTGAA TTTAACTCCT ATGCAAGAAT ACATATCGCC TATGCGTTTC TTTCATTTTC CTATTTTAAG AAAGATGCCT TTAAAGAAGC CTTTTTATAT TTTAATCAAA CGATTAGTGT ATTAATGGCA TTCTATAATC CTATTGATTT AAAGTACATA GTGGCACAGG ATATATTTCA ACTCATGGTA AAAGATGAGA GGGTAAATCA CAAATTAGTA AAAGAATTTA AAATGAAATA TGAGCTAAGT TATGATAAAT AA
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Protein sequence | MNFIGSIIRE YRCKLKMSRT MLAENICSEK YIYLIEKGER TPSADMVRLL SDRMGVDLFD HYQYLDCSNP ISVRETLKNF DICQRKSDFI TAKSIVDKAM YLADFKNKPW LYELEANRLG YMVFIENKYE EAIMDANKVL EDMEPKYLSS IHVVNLYVLL STCYQIIGDL NNAKSITLAA YNIVRSKYKI EKYDHNIVSV RLNLITLYYL TKDYEKAITE GKELIDYQIE FNSYARIHIA YAFLSFSYFK KDAFKEAFLY FNQTISVLMA FYNPIDLKYI VAQDIFQLMV KDERVNHKLV KEFKMKYELS YDK
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