Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0147 |
Symbol | |
ID | 5744301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 191877 |
End bp | 192836 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641291239 |
Product | VanW family protein |
Protein accession | YP_001557275 |
Protein GI | 160878307 |
COG category | [V] Defense mechanisms |
COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATGA AACAAAATGT CCTTATGACC GTACTACTAT GTTTGATGGT AATAATTTGT GTAGGATGCA ATAATGAGGC CCCACCAAAG GAACAGGATC ATTCTTTGGA TGGGGCTTTA CTTGATGTAA CACCTTCCAT ATCACCAGAG TCGGTAACGG CAACACCAAA CGCCGATTTC ATTTCGGAGG AAGGGAAAGA AACGATTACG GAGAATACAA CTCCATTAAA GCCAGGAAAT GTAGAAATCG ATGCCAATGC AATTTTGGGG CAATTTACAA CTCATTTTTA CAACTCATCG AAAGCAAGAA AAAATAATAT TGTTAATGCA GCGAAGAAAA TACATCTTAA AGTTGTAAAC CCAGGAGAGG TATTTTCAAC TGTTGGTGCT ATTTCTCCTA TTACAAAGGA TAATGGTTAT GATGATGCAG GTACCTATCA AGATGGTAGA GTTGTCAATG CTATTGGTGG AGGAGTTTGC CAAGTGTCCA CTACACTTTA CAATGCAGTA CTTGGGGCTG AATTAAAAGT AACAGAACGG CACCCTCACT CCATGACGGT AAGTTATGTG GAACTTGGTA GAGATGCAGC TATCGCTGGT GATTATATGG ATTTTTGTTT TCAAAATACA TTAGAAACGC CCATTGTAAT TGAAGCAATT GCGGATCCAG CTGGTAGTAT AACAGTACGG ATCCGTGGAG TTGAAACAAG AGATAAAAGT AAGCGAAAAG TTTCTTATGA ATCCGTTATT CTCGAAACAA TTGAGCCAGG GCCTGCAGTT ATAACTTATG ATAAAAATCA ACCAAAAAAT TATTTGAAAG TTACACAGTC TGCTCATAGT GGTTATAAAG TTGAACTATA CCGTTTAATC TACTACCAAG GAGAGCTTAT CGACCGTATT TTATTAAATA CTAGTACGTA TGAGGCAGCC CCACAATATT TAACCATAGG AATTAAATAG
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Protein sequence | MKMKQNVLMT VLLCLMVIIC VGCNNEAPPK EQDHSLDGAL LDVTPSISPE SVTATPNADF ISEEGKETIT ENTTPLKPGN VEIDANAILG QFTTHFYNSS KARKNNIVNA AKKIHLKVVN PGEVFSTVGA ISPITKDNGY DDAGTYQDGR VVNAIGGGVC QVSTTLYNAV LGAELKVTER HPHSMTVSYV ELGRDAAIAG DYMDFCFQNT LETPIVIEAI ADPAGSITVR IRGVETRDKS KRKVSYESVI LETIEPGPAV ITYDKNQPKN YLKVTQSAHS GYKVELYRLI YYQGELIDRI LLNTSTYEAA PQYLTIGIK
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