Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0138 |
Symbol | |
ID | 5744289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 180381 |
End bp | 181964 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641291227 |
Product | protein serine/threonine phosphatase |
Protein accession | YP_001557266 |
Protein GI | 160878298 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | [TIGR02865] stage II sporulation protein E |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.32132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGA GAAGAAGCTG GTTATTGCCA TTGGCAGGAG TTGTTGTTGC GTTAGTTACT TTTTTTAATG CAAGTCCGAA TGTTGTAGCA AGATATCTGA TTATAGCTAC CATCGTTATC ATATTGATAG GAATCGCGGC AGTGATTGTT GGCTTGCTGC AAGGCAGTGG TTCGGTTGAC AATGGAGAGA GTTATGTAAA AGATGAATTT CAAAACACAG CACGAAAGAA ATTGGAGGGT ATTTCTGGGT CTATTCATAA ATTGGCGTCA AGCTTTGATT ATATGGCATC CCCCAAGACG GTACTAAATA CAGAGGACAT GCAGTTGGTA CTCGAGGACA TTAGTACAAA CCTCTGTAAA AATTGTAAAA AATGTGGAGT ATGTTGGGAA AGAAATTTTA ATCAAAGTTA TCAAGCAACA TGGAATCTAC TTGAGACCGC GAAAGGGAAA GGAAATGTAA CTGTAGATGA TATGCCTGAT ATGCTAAGAC TTCAATGTAT TCAGGTTCCT GAATTTGTGG AGGAGGCAAA CCGTAATCTT AGTATGGCTC GCCTAAAGAT GGTTTGGCAC AACCGCATTG TTGAGAGTAG GGAAGCGGTA GCTGGGCAGC TTGGGGAGAT TGCAAGAATT GTGAAAGACT TCTCTGGAAA CCTATGCGAC ACCGGTGAAG TAATAGAGTT AAAACGAAGA AAAATAAATC AAAAACTTCG TGTACATAGA ATTAAAGTGC AGCGGGTCTT GATGTTTGAA CGGGAAAATC GAGGAATGGA GCTGCATTTA AGAGCAAGAT GCAAAAACGG CAGGTGCCTG ACAACGAAGG AAGCAGCGAT CTTAATTGGG AATGCTTTAG AAAGGAGGTT TGTGCCTAGA GAGGATTCAA GGAATGTCAT TGGGCGAGAA TACGATGATT ATGTCTTTTG TGAAGATGCT AATTTTAAGG TATTAACAGG TGTATCCAGA GCGTCAAAGA AAAAAGGTGA ATTAAACGGA GATAATTTTT CTTTTCTCTA TCCAGATAGC CAGGATGTTG TAATGATGCT ATCAGATGGT ATGGGGAGTG GAAGCGAAGC TTATGAAGAA AGTGAAATGG TAATTGAATT ATTGGAGCAG TTCTTAGAAG CAGGGTTTCG GGAAGAACCC GCAATTAAGC TTATCAACTC TGTCCTTGTT TTGCGCACCG AAAATTGCAT GTCTTCCACA GTTGATTTAT GTGTCGTTAA CTTATGTGCG GGGACATGCG AATTTGTAAA AATCGGAGCA GCCACCACTT TTATTAAGAG GGATCATTTT GTTGAGACCA TAAGTTCGAA CAGTATGCCT GCAGGAATTT TAAATCGAGT TGACTATGAT ACTAAGAGCA AAAAGCTTTA TGATGGTGAT TATGTTATCA TGGTATCAGA TGGGGTGATT GATTGTGTTG AAGAGGAGGA CAAAGAAGGG TATTTCATAA ATTTTATAAA AAATATTCCT TTTAAGTCAC CACAGGAAAT TGCAAATGCA ATTTTATCTG CTGCGCTAGA AAAGCATGGT TATGTGCCAG CAGATGATAT GACTGTCTTA GTTACTGGTA TTTGGAAAAA GTAA
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Protein sequence | MKKRRSWLLP LAGVVVALVT FFNASPNVVA RYLIIATIVI ILIGIAAVIV GLLQGSGSVD NGESYVKDEF QNTARKKLEG ISGSIHKLAS SFDYMASPKT VLNTEDMQLV LEDISTNLCK NCKKCGVCWE RNFNQSYQAT WNLLETAKGK GNVTVDDMPD MLRLQCIQVP EFVEEANRNL SMARLKMVWH NRIVESREAV AGQLGEIARI VKDFSGNLCD TGEVIELKRR KINQKLRVHR IKVQRVLMFE RENRGMELHL RARCKNGRCL TTKEAAILIG NALERRFVPR EDSRNVIGRE YDDYVFCEDA NFKVLTGVSR ASKKKGELNG DNFSFLYPDS QDVVMMLSDG MGSGSEAYEE SEMVIELLEQ FLEAGFREEP AIKLINSVLV LRTENCMSST VDLCVVNLCA GTCEFVKIGA ATTFIKRDHF VETISSNSMP AGILNRVDYD TKSKKLYDGD YVIMVSDGVI DCVEEEDKEG YFINFIKNIP FKSPQEIANA ILSAALEKHG YVPADDMTVL VTGIWKK
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