Gene Cphy_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0087 
Symbol 
ID5745014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp115437 
End bp117140 
Gene Length1704 bp 
Protein Length567 aa 
Translation table11 
GC content42% 
IMG OID641291176 
Producthydrogenase, Fe-only 
Protein accessionYP_001557216 
Protein GI160878248 
COG category[R] General function prediction only 
COG ID[COG4624] Iron only hydrogenase large subunit, C-terminal domain 
TIGRFAM ID[TIGR02512] hydrogenases, Fe-only 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAT ATATGATTAT TGATGGCAAC CGAGTGGAAT TTAACGATGA GCCAAATATC 
CTTGCTTTAG TTCGTAAAGC AGGTATCGAT CTTCCCACTT TTTGTTACTA TTCTGATTTA
TCCATCTACG GAGCTTGCAG AATGTGTGTA GTAGAAGATC AATGGGGTGG CATTATTGCC
TCCTGCTCCA CTCCTCCTAA GGATAAGATG GAAGTTAAAA CAAATACACC AAAACTTCAT
CAACATAGAA AGATGATATT AGAGTTATTA CTTGCTGCAC ATTGCAGGGA CTGTACGGTT
TGTGACAAAA ACGGTAAATG TCGCCTTCAA GAGTTAGCTC ACCGTTTTGG AATTAAGTCT
GTCCGTTTTG AAAATAAGAC GGAAGAGATG GAACTTGATA CCTCTTCTGC TTCCATTATT
CGTGATCCTG GAAAATGTAT TCTCTGCGGG GACTGTGTTA GAATGTGTAA CGAAATACAG
AATGTAGGTG CTATTGACTT TGCACACCGC GGTGCTAAAA TGATAGTAAG CCCTGCATTT
AATAAAAAAA TTGCTGAGAC CAATTGTGTA AACTGTGGTC AATGTGCTGC CGTTTGTCCT
ACCGCTGCGA TTACTGTAAA ATCAGATTTA AAGGACGTAT GGAAGGCAAT CTACAATCCT
AAAAAACGTG TTGTTGTTCA AGTTGCTCCT GCCGTTCGTG TCGCTCTCGG AGAAGAATTC
CATATGAAAG CTGGGGAGAA TGTCATTGGG AAAATTGTGG CTGCGCTTCG TAGATTAGGA
TTTGATGCGA TATTTGATAC CTCTGTTGGA GCTGACTTAA CTATTATGGA GGAGTCTAAA
GAGCTATTAA AGAAGCTTGA AGCAGGTGAA AACAAATACC CACTCTTCAC TTCTTGCTGC
CCTGGCTGGA TCCGCTACGC AGAAACGAAG CATAAAGAAT TACTTCCGTA CATTTCAACC
TGTAAATCTC CGATGGAGAT GTTTGGTGCT GTAATTAAAG AGCACTTTAA GGGACTTGAT
TCCACAGAAG GTGTCGAGAC AGTTTCGGTT GCAATTATGC CATGCTCTGC AAAGAAGTAC
GAAGCTTCTA GGGAAGAGTT TAAACGAAAC GACATCCCTG ATGTGGACTA CGTAATCACA
ACCATAGAAC TCGTAAAGAT GATTAAAGAA ATCGGTATTC AGTTTGAAGA AATTGAGCCA
GAAGCTCCAG ATATGCCATT CTCCTTGTAC TCCGGTGCAG GTGTTATCTT TGGTGTTACT
GGTGGAGTTA CAGAAGCTGC TGTTCGCCGT GTTGTCGCTG ATAAGAGTCC AAAAGCGCTA
AAAGACATTG AATTCTTAGG TCTGCGTGGT ATGGAGGGTG TAAAGGTTTG TGAACTTCAG
GTGGAAGAGA ACTCTATTGT CCGCATCGGT GTTGTCAGTG GTTTAGCAAA TGCAGAGGCT
TTGATTGAAA AGATTGAAAG CGGTGAAGAA CATTTTGATT TTGTTGAAGT AATGGCATGC
CCTGGTGGTT GTATTGCCGG TGCAGGTCAG CCATTTAGCC ACAAGGAAGA GAAAAATGCT
CGTGCATTAG GTATGTACAA AGCTGATAAG GTTTCACAGA TTAAAAGATG TGAAGAGAAC
CCTCTGATGC TCTCTTTGTA CAACGGTATG TTAAAACACC GTACTCACGA ATTGCTACAC
GTATCCTATC GAAAGGAAGA CTAA
 
Protein sequence
MAKYMIIDGN RVEFNDEPNI LALVRKAGID LPTFCYYSDL SIYGACRMCV VEDQWGGIIA 
SCSTPPKDKM EVKTNTPKLH QHRKMILELL LAAHCRDCTV CDKNGKCRLQ ELAHRFGIKS
VRFENKTEEM ELDTSSASII RDPGKCILCG DCVRMCNEIQ NVGAIDFAHR GAKMIVSPAF
NKKIAETNCV NCGQCAAVCP TAAITVKSDL KDVWKAIYNP KKRVVVQVAP AVRVALGEEF
HMKAGENVIG KIVAALRRLG FDAIFDTSVG ADLTIMEESK ELLKKLEAGE NKYPLFTSCC
PGWIRYAETK HKELLPYIST CKSPMEMFGA VIKEHFKGLD STEGVETVSV AIMPCSAKKY
EASREEFKRN DIPDVDYVIT TIELVKMIKE IGIQFEEIEP EAPDMPFSLY SGAGVIFGVT
GGVTEAAVRR VVADKSPKAL KDIEFLGLRG MEGVKVCELQ VEENSIVRIG VVSGLANAEA
LIEKIESGEE HFDFVEVMAC PGGCIAGAGQ PFSHKEEKNA RALGMYKADK VSQIKRCEEN
PLMLSLYNGM LKHRTHELLH VSYRKED