Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0087 |
Symbol | |
ID | 5745014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 115437 |
End bp | 117140 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641291176 |
Product | hydrogenase, Fe-only |
Protein accession | YP_001557216 |
Protein GI | 160878248 |
COG category | [R] General function prediction only |
COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAAAAT ATATGATTAT TGATGGCAAC CGAGTGGAAT TTAACGATGA GCCAAATATC CTTGCTTTAG TTCGTAAAGC AGGTATCGAT CTTCCCACTT TTTGTTACTA TTCTGATTTA TCCATCTACG GAGCTTGCAG AATGTGTGTA GTAGAAGATC AATGGGGTGG CATTATTGCC TCCTGCTCCA CTCCTCCTAA GGATAAGATG GAAGTTAAAA CAAATACACC AAAACTTCAT CAACATAGAA AGATGATATT AGAGTTATTA CTTGCTGCAC ATTGCAGGGA CTGTACGGTT TGTGACAAAA ACGGTAAATG TCGCCTTCAA GAGTTAGCTC ACCGTTTTGG AATTAAGTCT GTCCGTTTTG AAAATAAGAC GGAAGAGATG GAACTTGATA CCTCTTCTGC TTCCATTATT CGTGATCCTG GAAAATGTAT TCTCTGCGGG GACTGTGTTA GAATGTGTAA CGAAATACAG AATGTAGGTG CTATTGACTT TGCACACCGC GGTGCTAAAA TGATAGTAAG CCCTGCATTT AATAAAAAAA TTGCTGAGAC CAATTGTGTA AACTGTGGTC AATGTGCTGC CGTTTGTCCT ACCGCTGCGA TTACTGTAAA ATCAGATTTA AAGGACGTAT GGAAGGCAAT CTACAATCCT AAAAAACGTG TTGTTGTTCA AGTTGCTCCT GCCGTTCGTG TCGCTCTCGG AGAAGAATTC CATATGAAAG CTGGGGAGAA TGTCATTGGG AAAATTGTGG CTGCGCTTCG TAGATTAGGA TTTGATGCGA TATTTGATAC CTCTGTTGGA GCTGACTTAA CTATTATGGA GGAGTCTAAA GAGCTATTAA AGAAGCTTGA AGCAGGTGAA AACAAATACC CACTCTTCAC TTCTTGCTGC CCTGGCTGGA TCCGCTACGC AGAAACGAAG CATAAAGAAT TACTTCCGTA CATTTCAACC TGTAAATCTC CGATGGAGAT GTTTGGTGCT GTAATTAAAG AGCACTTTAA GGGACTTGAT TCCACAGAAG GTGTCGAGAC AGTTTCGGTT GCAATTATGC CATGCTCTGC AAAGAAGTAC GAAGCTTCTA GGGAAGAGTT TAAACGAAAC GACATCCCTG ATGTGGACTA CGTAATCACA ACCATAGAAC TCGTAAAGAT GATTAAAGAA ATCGGTATTC AGTTTGAAGA AATTGAGCCA GAAGCTCCAG ATATGCCATT CTCCTTGTAC TCCGGTGCAG GTGTTATCTT TGGTGTTACT GGTGGAGTTA CAGAAGCTGC TGTTCGCCGT GTTGTCGCTG ATAAGAGTCC AAAAGCGCTA AAAGACATTG AATTCTTAGG TCTGCGTGGT ATGGAGGGTG TAAAGGTTTG TGAACTTCAG GTGGAAGAGA ACTCTATTGT CCGCATCGGT GTTGTCAGTG GTTTAGCAAA TGCAGAGGCT TTGATTGAAA AGATTGAAAG CGGTGAAGAA CATTTTGATT TTGTTGAAGT AATGGCATGC CCTGGTGGTT GTATTGCCGG TGCAGGTCAG CCATTTAGCC ACAAGGAAGA GAAAAATGCT CGTGCATTAG GTATGTACAA AGCTGATAAG GTTTCACAGA TTAAAAGATG TGAAGAGAAC CCTCTGATGC TCTCTTTGTA CAACGGTATG TTAAAACACC GTACTCACGA ATTGCTACAC GTATCCTATC GAAAGGAAGA CTAA
|
Protein sequence | MAKYMIIDGN RVEFNDEPNI LALVRKAGID LPTFCYYSDL SIYGACRMCV VEDQWGGIIA SCSTPPKDKM EVKTNTPKLH QHRKMILELL LAAHCRDCTV CDKNGKCRLQ ELAHRFGIKS VRFENKTEEM ELDTSSASII RDPGKCILCG DCVRMCNEIQ NVGAIDFAHR GAKMIVSPAF NKKIAETNCV NCGQCAAVCP TAAITVKSDL KDVWKAIYNP KKRVVVQVAP AVRVALGEEF HMKAGENVIG KIVAALRRLG FDAIFDTSVG ADLTIMEESK ELLKKLEAGE NKYPLFTSCC PGWIRYAETK HKELLPYIST CKSPMEMFGA VIKEHFKGLD STEGVETVSV AIMPCSAKKY EASREEFKRN DIPDVDYVIT TIELVKMIKE IGIQFEEIEP EAPDMPFSLY SGAGVIFGVT GGVTEAAVRR VVADKSPKAL KDIEFLGLRG MEGVKVCELQ VEENSIVRIG VVSGLANAEA LIEKIESGEE HFDFVEVMAC PGGCIAGAGQ PFSHKEEKNA RALGMYKADK VSQIKRCEEN PLMLSLYNGM LKHRTHELLH VSYRKED
|
| |