| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0075 |
|---|
| Symbol | |
|---|
| ID | 5745002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 104245 |
|---|
| End bp | 105003 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641291164 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001557204 |
|---|
| Protein GI | 160878236 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4194] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGAA TACGTCGCAA AGCATGGAAT GATTGCTTTT TGAGTTTAGC GGTATGCAAC
ACTGTTTATG TAGTTATCAC TTACTTTTAC TTAAATAACA AAATGATATC TACGATGAGT
TTTATGCTAT CCACTATGAT TTATTCCGTT GTTATAGTAT TTATCAGTAT ATATAGTGAA
TTAAAAGTAC GAAAGTTACA AAGAAAGTAC AGTATGGATC AGCCCATGGA TGTCGTGGTG
GATGATGATA GTAACTGGAT TTTTGGTATG CTTTATTATA ATCCAAGAGA TAAACATACG
CTTATAGCAA AACGAGTTGG TATGGGTACG ACATGTAATC TTGCTACAAA AGCAGGTAAA
GTTTTAGCAG GTTTCGTTAT CATTGCCTTG TTATCAATTC CTTTATCTTG TGTATGGATA
TTCTTCGAAG AATTTACACC CATATCATTA CAGGTGGAAA ATCATGAATT AATAGCCACT
CATCTAAAAG AAGAGTATAA GATACCTCTG GATGAGATCA TTGAGATAGA GTATTTGACA
TCCTTGCCTA GGACATCAAA AAACGTTGGT ACTGGTTTGG ATAATCTTTA TAAGGGTGAT
TTTTCAGTCA AAGGTTATGG AAGCTGTGAG GTTTTCTTAA ATCCGGAGAC GGAGGCATTT
CTTGTTCTTC ATACGAAAGA AGAGACTTAC ATCTTCAGTG ATGAGACTAC GGAGAAAACC
ATAGAGGTAT ATAAGAAATT AAAGGAAGTA GTTCAGTAA
|
|---|
| Protein sequence | MTRIRRKAWN DCFLSLAVCN TVYVVITYFY LNNKMISTMS FMLSTMIYSV VIVFISIYSE
LKVRKLQRKY SMDQPMDVVV DDDSNWIFGM LYYNPRDKHT LIAKRVGMGT TCNLATKAGK
VLAGFVIIAL LSIPLSCVWI FFEEFTPISL QVENHELIAT HLKEEYKIPL DEIIEIEYLT
SLPRTSKNVG TGLDNLYKGD FSVKGYGSCE VFLNPETEAF LVLHTKEETY IFSDETTEKT
IEVYKKLKEV VQ
|
|---|
| |