Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2542 |
Symbol | |
ID | 6376240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2714263 |
End bp | 2714991 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642685020 |
Product | protein of unknown function DUF45 |
Protein accession | YP_001960917 |
Protein GI | 189501447 |
COG category | [R] General function prediction only |
COG ID | [COG1451] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.65103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGGTG CGTCAGTTAG TGACAACATG CATTCTCTTG TCTATGGGCG CAAGACCATC GAGTACTGTC TGTTGTATCG TGAAAGAAAA ACCATGGAAA TCGCTGTTCA TCCTGATAGT ACTGTTATGG TGAAGGCTCC GATTAACTCC AGTATTCCCT TGATCGAAAA CAAGTTAAGG AAAAAGTCAC GCTGGATTCT CCGGCAGATG AACTACTTCA AACAGTTTGA TCCCAGAACG CCCCCTCGCT GTTACGTGAA TGGCGAGACA CATCTCTATC TTGGGAAGCA ATACCGGTTG AAAATGATTC AGGGTACGGA AAACTCGGTT AAGCTTTTCC GGGGATGCTT TTATGTTACT ACAGATGATG CACCGAATCC GGAAACAGCC CGAAACATGC TGGACAAGTG GTATCTGGAG AAAGCGCGAT TGCATTTCAG GGAAAGCATG GATCGTTGCT GGAAAAAATT CAGGGAGCTC GATGTCGAAA AACCCGATTT GTCGATCAGG CGAATGCGAA AAAGATGGGG AAGTCTTTCA GATAAGGGAA CGGTAACCCT CAATACGTAT CTGATCAGAG CACCTAAGGA ATGCATCGAC TATGTTGTGA CTCACGAGCT TTGCCATCTG ATATTCCCTG ACCACAGCCC AGAATATTAT AAGCTGCTTG ATTCAGTCAT CCCCGGCTGG GAGAAGATAA AACACAAACT TGAACTCAGT ATGGTGTGA
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Protein sequence | MIGASVSDNM HSLVYGRKTI EYCLLYRERK TMEIAVHPDS TVMVKAPINS SIPLIENKLR KKSRWILRQM NYFKQFDPRT PPRCYVNGET HLYLGKQYRL KMIQGTENSV KLFRGCFYVT TDDAPNPETA RNMLDKWYLE KARLHFRESM DRCWKKFREL DVEKPDLSIR RMRKRWGSLS DKGTVTLNTY LIRAPKECID YVVTHELCHL IFPDHSPEYY KLLDSVIPGW EKIKHKLELS MV
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