| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2506 |
|---|
| Symbol | |
|---|
| ID | 6376204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2675327 |
|---|
| End bp | 2676724 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642684984 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001960881 |
|---|
| Protein GI | 189501411 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.277466 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAG ATAAGACGAT TCAGGGTAAA AAAGAACAGC AGATTTGCGC CATTTTGCCG
AGCGACGACC AGCTCACCGG CAGGGCCGGT TTGAGCGTCT TCGCACTGTA CCTGCGCAAC
ATAGGGCTGT TTCCGATTAT TGACCGCCTG TTCGGTACAG TGCGGAAGAA TGGCAAGGGC
CTGGCGGTCA CCGAGATGTT CGTGCAGATT TTGAGCTTCT TCATGGATGG TACGAGCCGC
CATCTGAACT GGTTCGATCA TCTTGCCGCT GATGATGCCT ATGCCGGCCT GCTCGGTACC
GGTAGATTGG CCTCGTCGCA TGCCGTCAAG CGTTTTATCG GGGCTATCTC CTTCTGTCGG
ATTTACCTGT TCCGGAGATT GCTGCAGGAT GTGTTTCTCT GGCGCCTGAA GCACACCAGG
CCGGAAGTGA TCATGCTCGG CATTGATACG ACGGTTCTGG ACAATGACGA TGCCGAGAAG
CGCCATGGGG TGCAACCCAC ATACAAGAAG GTCAAAGGGT TCCAGCCCTT GCAGATGAAC
TGGGGCAGGT ATGTGGTGGA CGCGGTGTTC CGTGGAGGAA AGAAACACTC GAACCACGGC
AATACGGTCA ATGAGATGCT GGTGCATATG GTAAGGAAAA TCCGGAACGC TTACAGGGAA
GAGGTTCCGA TCATTGTGCG CATGGACGCC GGGTTCTTCG ACGACGAAGT ATTCAAGACC
TGTGAGCAAC TGCAAATCGG TTATCTGTGC GGCGGCAAGC AGTACAGCAA TGTTCTTGAT
GAGGTTGCCG ATGCGGTCGA CTGGCAATCG TTCAAAAAAG TCGAAACTGA CTCAAAAAGC
TGGATGTACA CCGAATTCAT GAGCAGACAA AAGAAATGGA AGAAAGAGCG CCGGACGATC
TTCAGTACGC TCTGGGAAGA GGACGGGCAG TATCTGCTGC AAGGCATATG TCGTGATTCC
GTCATCATCA CCAATATGGG CATGGGTGAA AAGATTGATG AGCAGCTTGC CAAGGTCGGC
CGTGAGGACT TGCTCGACGC CGGAAAGCTT CTTGGCCTCT ACCACGAAAG GGGAACAGAC
GAACTAACCA ACCGTGCATT GAAGACCTTC GGCCATGAGC AGCTACCGTT CAAGCGATTC
ACTGCAAACT CGGCCTGGTA CTACCTGATG GTGCTTGGCA ACAACCTCTT TGAAGCCTTC
AAGGAAGACG TGACCGAAGC GGTCATTCCG GTGTCGGCTT ATGCCGACAC CTTCCGCCGC
AGGTTCATCG ATACAGCCGG AAAACTGGTG CGCCATGCCG GGAAGCTGGT CATGAAAGTC
AGCAAGGTTG ACTATGTTCG CCTGAAGTTC GACCAGCTGT ATGAGAAATG CCGTGTCGGA
CTTCCGCGAC TGGAATAA
|
|---|
| Protein sequence | MAKDKTIQGK KEQQICAILP SDDQLTGRAG LSVFALYLRN IGLFPIIDRL FGTVRKNGKG
LAVTEMFVQI LSFFMDGTSR HLNWFDHLAA DDAYAGLLGT GRLASSHAVK RFIGAISFCR
IYLFRRLLQD VFLWRLKHTR PEVIMLGIDT TVLDNDDAEK RHGVQPTYKK VKGFQPLQMN
WGRYVVDAVF RGGKKHSNHG NTVNEMLVHM VRKIRNAYRE EVPIIVRMDA GFFDDEVFKT
CEQLQIGYLC GGKQYSNVLD EVADAVDWQS FKKVETDSKS WMYTEFMSRQ KKWKKERRTI
FSTLWEEDGQ YLLQGICRDS VIITNMGMGE KIDEQLAKVG REDLLDAGKL LGLYHERGTD
ELTNRALKTF GHEQLPFKRF TANSAWYYLM VLGNNLFEAF KEDVTEAVIP VSAYADTFRR
RFIDTAGKLV RHAGKLVMKV SKVDYVRLKF DQLYEKCRVG LPRLE
|
|---|
| |