| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2496 |
|---|
| Symbol | |
|---|
| ID | 6376192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2664571 |
|---|
| End bp | 2667459 |
|---|
| Gene Length | 2889 bp |
|---|
| Protein Length | 962 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642684973 |
|---|
| Product | protein of unknown function DUF1156 |
|---|
| Protein accession | YP_001960871 |
|---|
| Protein GI | 189501401 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1743] Adenine-specific DNA methylase containing a Zn-ribbon |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTGCA AGAAAAAACT TATAGAAGTA GCCCTGCCGC TGGAAGTGAT CAATGTTGCC
AGCGCGCGGG AAAAATCGAT ACGGCACGGC CATCCTTCGA CGCTGCATTT GTGGTGGGCG
CGGCGGCCGC TGGCGGCGGC GCGAGCGGTG ATCTTTGCGC AGATGGTTGA TGACCCTTCG
GCCCATCCTG ACCTGTTTCC CACTGAAAAG AAGCAGGAGA AAGAGCGGCA GCGGTTGTTC
CGCATCATCG AGGATCTGGT GAAGTGGGAG AACACCACGA ACGAAACGGT ATTGCAGCAG
GCGCGCGACG AGATTTGGCA GAGCTGGCGC TACACCTGCG CCGAGAATGC TGACCACCCG
AGAGCTGCCG AAATCTTCGA CCGTTACAAG CTGCCGGATT TTCACGATCC CTTTGCTGGC
GGCGGAGCCC TGCCGCTCGA AGCACAACGG CTCGGGATGG AGAGCTATGC AAGCGACCTG
AATCCGGTGG CCGTACTCAT CAACAAAGCG ATGATCGAGA TTCCTCCGAA GTTTGCCGGA
AAGCCGCCGC TCAACCCTGC GTGGTACAAC AAGTCCGAAA CGGAGAAGAT GGGGCGAGAG
TGGAAAGGTG CGCAGGGGCT TGCCGGCGAT GTGCGGTATT ACGGCCAGTG GATGCGTGAC
GAAGCTGAAA AGCGAATAGG CCATCTCTAT CCCAAAATCG AGGTTACGGA AGCGATGGCT
GAAGAGCGGA CCGATCTGAA AAAATATGTC AGCAGAAAGC TCACGGTGAT TGCCTGGCTC
TGGGCACGAA CGGTCAAAAG CCCCAACCCG GCCTTTGCCG ATGTCGATGT GCCGCTTGCC
TCGACCTTCA TGCTTTCCAC CAAGGCAAGC AAGGAGGCGT ATGTTGAACC GGTCATCGAA
GATGGCGGGT ACCGGTTCAC TGTAAAGATT GGTAAACCGA CAGATGTGGA TGCGGTAAAG
CGAGGCACAT CAGCAGGGAA ACGTTCGGCT TTCCGCTGCC TTATGTCCAG CGCTCCTGTT
TCCTATGACT ATATTCGTGA GGAAGGAAAA GCCGATAGAA TGGGGGTAAA GTTGATGGTG
ATTGTCGCAG AAGGCGATCG GGGGCGAGTC TATCTTTCGC CGACGGAGGA GATGGCAGCG
ACTGCGTTGC AAGCCACACC GGACTGGAAA CCTGACACCC CATTGCATGG AAAATGCCGC
GTCAATGTCT CAAATTATGG TTTGGATGTT TATGGTGATC TCTTCACCCC GCGCCAGCTT
GTGGCGCTGA CGACCTTCTC TGATCTGGTG CAGGAAGCGC GTGAACGGGT AAAGCAGGAT
GCCATTCAGG CCGGTTTGCC CGATGATGGC AAGCCTCTTG CAGAACAGGG CGCTGGCGCG
GCTGCCTATG CTGACGCTTT GGCGGTGTAT CTTGCGTTTG TCATAGATAA AACATCGGAT
AGAGGCTCAA CGATATGTAG CTGGGATTCT TCGAGAGATA GCTTGAGAAA TACATTTGGT
CGTCAGGCAA TACCAATGAC GTGGGACTTT GCTGAGTCGA ATGTTTTATC GGAATCCACT
GGTGGTATCT CAAGCGGATT AGATCAAGTT TATCGCGTTT TGGTTGGATT GCCGCAAAAT
ACTGTTGGGA AATCTTCTCA ACAAGACGCA CAAACGCAAT CTATTTCAAG AGATAAGGTT
ATCTCAACGG ACCCACCCTA CTACGATAAT ATAGGTTATG CCGATTTGTC TGATTTTTTC
TATGTCTGGA CACGTCGCTC ATTAAAGTTC GTTTTCCCTG ACCTTTTCTC CACGCTTGCC
GTTCCAAAGG CTGAAGAGCT GGTGGCAACC CCCTATCGCC ACGGCAACCG CGAAAAAGCG
GAAACATTCT TTCTCAATGG CATGACGCAG GCGATGCACC GGCTTGCAGA GCAGTCTCAC
CCAGCCTTTC CGGTGACGAT TTACTATGCC TTCAAACAGT CGGAGACTGG AAATGATGAC
GGTACGACCA ATACCGGTTG GGATACCTTT CTTGCTGCCG TGATCGAGGC CGGTTTTTCC
ATCAGCGGAA CCTGGCCGAT GCGCACCGAA CTGAGCAATC GCATGATCGG TTCAGGTACT
AACGCCCTTG CTTCAAGTAT CGTGCTTGTT TGTCGTAAGC GTCCGGAAAA CCCGCCAGTC
GCCACGTTCC GCGAATTCGA TACCGCGCTC AAGTCTGAAT TGCCTCAGGC GCTTTCGCAA
TTGCAGGCGG GCAATATCGC ACCGGTCGAT CTTGCGCAAG CGGCCATCGG CCCCGGCATG
GCGGTCTATA CGCGCTATGC TAGCGTGCTC GATGCGGAAG GCAGGCCTTT AACGGTCCGT
GCGGCCCTTG CCCGGATCAA CAAGGTGCTC GACGAAGCGT TGGCCGAGCA GGAGGGCGAT
TTCGATGCCG ACAGCCGATG GGCACTGGCC TGGTTCGAGC AGATGGGCTT CAACGACGCT
GAATTCGGTA CTGCCGACGT GCTGGCGCGG GCAAAGGCGA CCTCGGTTGG CGGTATTGTC
GAGGCGGGTA TCGCTTTTTC CGGAAAGGGC AAGGTGCGTC TCTTCAGGCC GTCGGAACTT
CCCTCCGATT GGGATCCATC CACCGACAAG CGATTGACCG TCTGGGAGAT GGTGCATCAG
CTCATCCGCG TGCTGGAAGC GGAGGGTGAG CCTGCGGCGG CGGAACTGGT CGCAAAACTT
GGCAGCGAGG CCGAAACGGC GCGTGAACTC TGTTATCGGC TCTATACCCT CTGCGAGCGC
AAAAAGCGAC CTCAGGAGGC GATGGCCTAC AATGCCCTCG TGCAGAGCTG GCCTGAACTC
ACCCGGCTTG CAGGCGAAAT GCCCTCCCTC CCGGCTTCCG GTACCTATAA CCTGTTTGAA
AACGAGTAA
|
|---|
| Protein sequence | MTCKKKLIEV ALPLEVINVA SAREKSIRHG HPSTLHLWWA RRPLAAARAV IFAQMVDDPS
AHPDLFPTEK KQEKERQRLF RIIEDLVKWE NTTNETVLQQ ARDEIWQSWR YTCAENADHP
RAAEIFDRYK LPDFHDPFAG GGALPLEAQR LGMESYASDL NPVAVLINKA MIEIPPKFAG
KPPLNPAWYN KSETEKMGRE WKGAQGLAGD VRYYGQWMRD EAEKRIGHLY PKIEVTEAMA
EERTDLKKYV SRKLTVIAWL WARTVKSPNP AFADVDVPLA STFMLSTKAS KEAYVEPVIE
DGGYRFTVKI GKPTDVDAVK RGTSAGKRSA FRCLMSSAPV SYDYIREEGK ADRMGVKLMV
IVAEGDRGRV YLSPTEEMAA TALQATPDWK PDTPLHGKCR VNVSNYGLDV YGDLFTPRQL
VALTTFSDLV QEARERVKQD AIQAGLPDDG KPLAEQGAGA AAYADALAVY LAFVIDKTSD
RGSTICSWDS SRDSLRNTFG RQAIPMTWDF AESNVLSEST GGISSGLDQV YRVLVGLPQN
TVGKSSQQDA QTQSISRDKV ISTDPPYYDN IGYADLSDFF YVWTRRSLKF VFPDLFSTLA
VPKAEELVAT PYRHGNREKA ETFFLNGMTQ AMHRLAEQSH PAFPVTIYYA FKQSETGNDD
GTTNTGWDTF LAAVIEAGFS ISGTWPMRTE LSNRMIGSGT NALASSIVLV CRKRPENPPV
ATFREFDTAL KSELPQALSQ LQAGNIAPVD LAQAAIGPGM AVYTRYASVL DAEGRPLTVR
AALARINKVL DEALAEQEGD FDADSRWALA WFEQMGFNDA EFGTADVLAR AKATSVGGIV
EAGIAFSGKG KVRLFRPSEL PSDWDPSTDK RLTVWEMVHQ LIRVLEAEGE PAAAELVAKL
GSEAETAREL CYRLYTLCER KKRPQEAMAY NALVQSWPEL TRLAGEMPSL PASGTYNLFE
NE
|
|---|
| |