Gene Cphamn1_2472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2472 
Symbol 
ID6376167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2638206 
End bp2639651 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content51% 
IMG OID642684949 
ProductAlkaline phosphatase 
Protein accessionYP_001960847 
Protein GI189501377 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1785] Alkaline phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000616832 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGGTT TCAGCCATAG GTTGATCAGT ATAGTGACCT GTATCGGTGC AGTTTTCTGT 
TTTGTCGCGT GCAGTACTTC GGGCATGGTT CAATCTGACA GGATCCCTGC TCAACAAGTT
GTTCCCAGAT ATGTTTTTTA TTTCATCGGC GACGGCATGG GTGCTGCGCA GGTTAAGCTT
GCAGAAAGTC TGCTTGAAAG TGGAGATTCT CTTGAAATGA CCTCTTTTCC GGCGTCCGGA
ATGGCGGCGA CGCATGCAGA AAATCGCTAT ATCACCGGAT CTGCGGCGGC AGGAACCGCA
CTTGCTACAG GGAAAAAGAC AACCATAGGG ACAATCGGAA AGAACGGGTC TCATACGGCC
ACCCTGAAAA CCATGGCGGA GATGTCGAGG GATAGAGGTA TGCGGGTAGG CATTGTTTCC
AGCGCCAGCA TCGATCACGC CACACCTGCC TGTTTTTATG CTCATGTTGA CAGCCGGAAA
ATGTATGCTG AAATTGCAGC GCAAATGGCC TCGAGCGGTT TCGATTACTT TGGAGGAGGT
TATGCCCTCG GTGATCTTGA TAACGGCAGG CCTCTGGGAA GACTGGTCGG GACAATGAAG
GATAGCGGTT ATGCCGTAGT ACAGGGATGG GAGGCACTGG GAAAGGCGGT TACCGGCAGG
AAATACTGGG CATTTGGCAG CTATGACGGT ACAGGCGCTC TCGGCTATGC TATCGACAGG
GCTCCGGACG GGCTCACGCT TGCGGATTTT ACGAGGCATG GCATCAGACT CCTGGATAAT
GATCGAGGAT TTTTCCTGAT GGTCGAAGGA GGAAAAATTG ACTGGGCAAG CCATGCGAAC
GATGCGGCTA CAACAGCGCA TGAAGTACTG GAATTTGACG AGGCCGTCGC AGAAGCGGTC
TCTTTTTACA GGCTTCATCC TGACGAAACA CTTATTGTTG TGACCGCTGA CCATGAATGC
GGAGGGCTTG CGCTTGGAAA CAGAGCGACC GCCTATGAAA GCGATTTCAC TATTTTAAGT
CACCAGAAGC TTTCTTTTCA GGCGTTTGCC GGTAAGGTCA AAACGTGGGT TGAACGGAAA
AACGTCTCCT TTCCAATGGT TCTTGACAGC GCGAAAGTCT ATTTTGGCCT TGGGGATTCT
GCACTTGATG CTTCGCTGAA GCTGAGTCCG CGGGAAAGGA CGGCGATCAG GGATGCCTGG
AAAGCAAGCC GGGAAGGACG CGGCACTGCC CTTGCCTATG GATCAGGAGA TCCCCTTACC
GTAACGCTCA TAGCGATATT AAACGAAAAG GCAGGGATAG GATGGACAAG TTCAGTGCAT
ACCGCAGGAC TTGTTCCTGT TTTTGCCATA GGTCAGGGCG CTAACCGGTT CAACGGGGTG
TATGACAATA CGGATATTGC AAAAAAACTT ATCGATCTGA TTGGACGTAT TGACAATTCG
CGCTGA
 
Protein sequence
MRGFSHRLIS IVTCIGAVFC FVACSTSGMV QSDRIPAQQV VPRYVFYFIG DGMGAAQVKL 
AESLLESGDS LEMTSFPASG MAATHAENRY ITGSAAAGTA LATGKKTTIG TIGKNGSHTA
TLKTMAEMSR DRGMRVGIVS SASIDHATPA CFYAHVDSRK MYAEIAAQMA SSGFDYFGGG
YALGDLDNGR PLGRLVGTMK DSGYAVVQGW EALGKAVTGR KYWAFGSYDG TGALGYAIDR
APDGLTLADF TRHGIRLLDN DRGFFLMVEG GKIDWASHAN DAATTAHEVL EFDEAVAEAV
SFYRLHPDET LIVVTADHEC GGLALGNRAT AYESDFTILS HQKLSFQAFA GKVKTWVERK
NVSFPMVLDS AKVYFGLGDS ALDASLKLSP RERTAIRDAW KASREGRGTA LAYGSGDPLT
VTLIAILNEK AGIGWTSSVH TAGLVPVFAI GQGANRFNGV YDNTDIAKKL IDLIGRIDNS
R