| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2442 |
|---|
| Symbol | gpsA |
|---|
| ID | 6376137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2604434 |
|---|
| End bp | 2605438 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642684920 |
|---|
| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
|---|
| Protein accession | YP_001960818 |
|---|
| Protein GI | 189501348 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA CGGTTTTAGG CGCGGGCAGC TGGGGCACCA CTCTTGCCGT CCTTCTTGCC
GGAAAAGGAG CTTCGGTTCG TCTGTGGGCG CATCGGCCGG AATTTGCGCG CGAGCTCGAA
GCCAGCCATG AAAATGTCCG GTACCTGCCG GGGGTTACCA TTCCTGATTC TATCCGTATT
GAGGATGATA TTGTCAGGGC AGTCCAGGGA GCCTCTATTA TTGTTACCGC AGTGCCTTCG
CAGGCATTGC GCGAAACACT TGCCCTCTTC AGGGATGTTT CCCTTTCAGA TACAATTATT
GTCAACGTCG CCAAAGGAAT CGAGCTCGAC ACCGGAAAGC GTTTGTCTGA GGTAATACCG
GAGGTTCTTC CTGCAGTCTC TCCCGCACAG GTCGCTGTCC TCTATGGACC GAGTCACGCG
GAGGAGGTGT CGGATAAACA GCCTACAACC GTGGTTGCTG CATCCTCTTG TCTCGAGACC
GCCGAAAAAG TCCAGGAAGC CTTTCATACC AGCATGTTTC GTGTGTATGT CAATACTGAT
ATAATCGGTG TTGAAATCGC AGGTTCTGTA AAGAATATCA TTGCCATCGC AGCGGGAATA
TCCGACGGCA TCGGTTATGG TGACAACGCG AAAGCAGCGA TCATCACCAG GGGACTGGCA
GAGATGTCCC GTCTTGCCGT CAGTCTCGGG GGGGAGCCGA TGACTGTTTC CGGCCTTTCA
GGTATAGGAG ATCTCGTAGT GACCTGTCTG AGCCGTCACA GCCGTAATCG TTATCTCGGA
GAGCAGATCG GCAAGGGACG GAGTCTGGAG GAGGTTATCA GCCATATGAA TATGGTTGCT
GAAGGAGTTT CCACGACAAA AGCCGTGTTT TCTTTGAGCA GCAGGCTGGG GGTCGATATG
CCGATAACCA GCGCGGTCTA CGAGATGCTC TTTGAAAACA AGCCTGCCGA ACAAGCCATT
CTCGACCTGA TGACACGTGA GCCGAAAAAA GAGTTAGGTT ATTAG
|
|---|
| Protein sequence | MKITVLGAGS WGTTLAVLLA GKGASVRLWA HRPEFARELE ASHENVRYLP GVTIPDSIRI
EDDIVRAVQG ASIIVTAVPS QALRETLALF RDVSLSDTII VNVAKGIELD TGKRLSEVIP
EVLPAVSPAQ VAVLYGPSHA EEVSDKQPTT VVAASSCLET AEKVQEAFHT SMFRVYVNTD
IIGVEIAGSV KNIIAIAAGI SDGIGYGDNA KAAIITRGLA EMSRLAVSLG GEPMTVSGLS
GIGDLVVTCL SRHSRNRYLG EQIGKGRSLE EVISHMNMVA EGVSTTKAVF SLSSRLGVDM
PITSAVYEML FENKPAEQAI LDLMTREPKK ELGY
|
|---|
| |