Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2371 |
Symbol | |
ID | 6376066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2538345 |
End bp | 2539880 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642684853 |
Product | transposase IS4 family protein |
Protein accession | YP_001960751 |
Protein GI | 189501281 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5421] Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGGAG ACTTGACAAT CAGAAAGGTG CGAACTGCAT CTGGTGCAAC TGCCGTTCAG GTGGTTCAGA ATAAAGGGAA ACAGCGTTCC TTTCTCAAGC ATATCGGCAG TGCTCATAAT GAGCAGGAAC TCGAACTGTT GATGGCTAAA GCCGAGAAAT ACGTTGAAAC CCATTGCAGA CAGCCAAGCC TGTTTGCTGA CACTCCACCA TCACCTTCAT CGCTCCAGAC AGCTCTTGCA GGCTCCAAGC TTGTCGGCGT CACCCATCAG TATGCGCGCA ATACGCTTCA TGCCTGCGCT CGAAAATGCG GTCTCGGCTT TTTGCCGGAA CTGTATTTGG ATCTGGCGCT CATGCGTATC ATCGAGCCCG CCTCGAAGCT GCGTACGCTG GAGCTTCTGG AGTGGTATTT CAATGTCCGT TATGCCAGAA GAACTCTCCA TCGCATGCTC AGCAAGCTGC TTGAGCATCA GGAGGCGATC GAGATGGCAG CTATCCAGAC TGCCCAGAAC GATCTGCAGG ACAAATTCAT CCTGGTGCTC TACGATGTCA CTACGCTGTA CTTCGAGTCC TTCAAGGAAT ATGACTTCCA ACGTCCCGGG TTCTCGAAGG ACAACAAGCC ACAGCAGCCG CAAATCGTCA TCGGCCTGAT CACCACCCGC TCAGGGTTCC CTGTCATGCA CGAGGTGTTC GAAGGCAACA CCTTTGAGGG GCATACCATG CTGGCCATCG TGCACCGCTT CCAGGAGCGG GTCGGAAATA CCAAGCCGGT GATCGTTGCC GATGCCGCTA TGCTCTCGAA AGCCAACATG CAGCAACTGG AGTCTGAAGG ATATCGCTAT ATCGTGGGAG CCCGGCTGGC GAACACTGCA GCCAACTTCA TCGATCAGAT TCACACGGCA CTGCCTCGAA CGGACAAGGC TATACGACGC TTCAGCTATG ATGGCGTCGT GAAAAATGCC ACCATGATCT GTGAGTTCTC TGATGCCCGG TACAAGAAGG ACAAGCGGGA CTTCGACAAG CAGGTCAAGC GAGCGCTTGT TCTGCTTGAA CGCAATGAGC CCGGCAGACG GGCTAAATTC ATCAAGAAGT CCAAAGAGAA AGACAAACCC TTCATCTTCG ATGCCGGCCT ACAGGCAAAG ACAGAGAAGC TTCTCGGTAT CAAAGGCTAT GTCACTAACA TCACAGAAGA CGAGTTGTCC AGTAGCGAGC TTATCGCATA CTATCGCGAT CTCTGGCACG TCGAACAGGC ATTCCGCATG AGCAAGTCTG ACCTGCAGGC ACGACCGATC TTCCATCGTA CGCAAGATGC CATCCGCGCC CACATGCTCA TTTGCTTCAT GGCACTGATG ATGGGAAAAT ACCTCGAGAT AAAAACGGGT CGCTCGTTAC GACAGATCCG GAAAAAACTC TGGCAGGTGC ATGAAGCCCA TATCCTTGAT GAGCAAACCG GTGAGGTACA TGTGATGCAG ATGGATGTCG GCGAATTTGC GGGCAGCGAA CTCAATAAAC TCTTGGATTC TGGGTTTTCG CACTAA
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Protein sequence | MRGDLTIRKV RTASGATAVQ VVQNKGKQRS FLKHIGSAHN EQELELLMAK AEKYVETHCR QPSLFADTPP SPSSLQTALA GSKLVGVTHQ YARNTLHACA RKCGLGFLPE LYLDLALMRI IEPASKLRTL ELLEWYFNVR YARRTLHRML SKLLEHQEAI EMAAIQTAQN DLQDKFILVL YDVTTLYFES FKEYDFQRPG FSKDNKPQQP QIVIGLITTR SGFPVMHEVF EGNTFEGHTM LAIVHRFQER VGNTKPVIVA DAAMLSKANM QQLESEGYRY IVGARLANTA ANFIDQIHTA LPRTDKAIRR FSYDGVVKNA TMICEFSDAR YKKDKRDFDK QVKRALVLLE RNEPGRRAKF IKKSKEKDKP FIFDAGLQAK TEKLLGIKGY VTNITEDELS SSELIAYYRD LWHVEQAFRM SKSDLQARPI FHRTQDAIRA HMLICFMALM MGKYLEIKTG RSLRQIRKKL WQVHEAHILD EQTGEVHVMQ MDVGEFAGSE LNKLLDSGFS H
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