Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2354 |
Symbol | |
ID | 6376049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2522534 |
End bp | 2523436 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642684838 |
Product | Bile acid:sodium symporter |
Protein accession | YP_001960736 |
Protein GI | 189501266 |
COG category | [R] General function prediction only |
COG ID | [COG0385] Predicted Na+-dependent transporter |
TIGRFAM ID | [TIGR00841] bile acid transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCA TACATCGTCA TTTTCTTACC ATAGCCGTAG GGGCGTCGAT CGTTGCCCTT GCTGTTCCGG AAATTTTTTT ATGGATTAAA CCGTTCATTC CGCTCTTGCT TGGAGTTATC ATGTTCGGCA TGGGCACGAC AATCCGCTTT CATGACTTCA GGGATGTCTG GGAAAAAAGA AACGTGATTT TTCTTGCGGC ACTGATTCAG TATACCGTTA TGCCGGGTCT TGCCGTTCTC ATCAGCTTCG TGATGTCGTT ACCTGAGGAA GTCATGATCG GCATGGTGCT CGTCGGGAGC TGTCCCGGAG GAACCGCATC AAATGTGATT GTCTATCTTG CGAAGGGTAA TGTCGCACTT TCGGTGACCA TGACCATGTT TTCCACCCTG CTTGCGCCTC TGCTTACTCC GGGAATCATC TATCTGATTC TCAGCAGGTC GATTGAATTT TCCTTTGGCG GGTTGTTTCT CTCGGTGTTT CAGATCGTTG CTCTTCCTCT TTTTGCCGGG CTTCTTGCAA GGAGGTTATT CAGCAGCACG GTTGACCGTT ACAGTGACAA TCTGCCGGTT ATATCTGTTG TCTCTATTTC CCTGATCATT GCCTGTGTCA TGGCCTTGAA CGCTGACAGT GTGCTTGCTT TCCCTGTCCT GACAATAGCG GCTGTGATGC TGCATAATCT GTCCGGCCTT GTTTCAGGGT ATGGCGTGGC TAAATTGTTC GGGAGCAATC GAGTCGATTG CAGAACGATA GCCATCGAGA TCGGTATGCA GAACTCCGGT CTCGGTGTGG CGCTGGCCAA TCAGTTCTTT CAGCCTCTTT CCGCGCTGCC CGGCGCGATA TTCAGTCTTT GGCACAATCT TTCGGGAATC GTGCTCGCGA GGTTCTGGGG CGGGAGGGAA TAA
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Protein sequence | MNTIHRHFLT IAVGASIVAL AVPEIFLWIK PFIPLLLGVI MFGMGTTIRF HDFRDVWEKR NVIFLAALIQ YTVMPGLAVL ISFVMSLPEE VMIGMVLVGS CPGGTASNVI VYLAKGNVAL SVTMTMFSTL LAPLLTPGII YLILSRSIEF SFGGLFLSVF QIVALPLFAG LLARRLFSST VDRYSDNLPV ISVVSISLII ACVMALNADS VLAFPVLTIA AVMLHNLSGL VSGYGVAKLF GSNRVDCRTI AIEIGMQNSG LGVALANQFF QPLSALPGAI FSLWHNLSGI VLARFWGGRE
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