Gene Cphamn1_2298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2298 
Symbol 
ID6375993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2467366 
End bp2468547 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content50% 
IMG OID642684785 
Productelongation factor Tu 
Protein accessionYP_001960683 
Protein GI189501213 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0189687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00385898 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAAAG AGGCATACAA GAGGGATAAG CCCCATGTCA ATATTGGTAC CATTGGTCAC 
GTTGATCATG GTAAGACAAC GCTTACAGCA GCAATAACAT CCGTGCTGGC AAAAGCAGGA
AATGCAGAGA TGCGTGAATT CGGAGATATC GACAAAGCTC CTGAAGAGAG AGAGCGCGGT
ATTACGATTT CGACAGCTCA CGTTGAGTAC CAGACAGAAA AGCGTCACTA TGCGCATATC
GACTGTCCCG GTCACGCTGA CTATATCAAG AATATGATTA CCGGTGCGGC GCAGATGGAT
GGTGCGATTC TGGTTGTCGC GGGTACAGAC GGTCCTATGC CGCAGACTCG TGAACACATT
CTGCTTGCCC GTCAGGTGAA TGTTCCTGCT CTTGTTGTGT TTCTGAACAA GGTGGATATC
GCGGATCCTG AACTTCTCGA GCTGGTTGAG CTTGAGCTTC GTGAACTGCT TACAGAGTAT
GATTTTCCTG GTGACGATAT TCCGATCATC AAAGGTTCCG CGTTGAAGGC TCTCGAAGGC
GACGCTGAGG CCGAAAAGGC CATCATGGAG CTTATGGATG CAGTTGATGA CTATATTCCT
GAGCCGGTTC GCGACGTCGA CAAACCGTTT TTGATGCCTG TTGAAGATGT CTTCTCTATT
TCCGGTCGCG GTACTGTCGG TACCGGACGT ATCGAGAGAG GCGTTGTCAA GATAAACGAA
GAGGTCGAGC TTGTCGGTAT CAAGCCTACC AAGAAAACAG TTGTAACCGG CATCGAGATG
TTCCAGAAGA TCCTCGATCA GGGTCAGGCC GGTGATAACG CGGGTCTTCT TTTCAGAGGA
GTCGGTAAGG ATGAGATCGA GAGAGGTATG GTTGTCGCCA AGCCGGGAAC GATTACTCCG
CACACCAAGT TCAAGGCCGA GGTCTACATT CTGAAAAAGG AAGAGGGTGG CCGTCATACA
CCGTTTTTCA ACAACTACCG CCCGCAGTTC TATTTCAGGA CCACTGATGT GACCGGTGCT
GTAACACTGC CTGAAGGTGT CGAGATGGTT ATGCCTGGTG ATAATCTGTC GATCGAGGTT
GAATTGATCG TTCCGATCGC CATGGATGAG AATCTGAGGT TTGCTATCCG TGAGGGTGGA
CGTACTGTCG GTGCAGGAAC GGTAACCCAG ATTATCGAGT AA
 
Protein sequence
MAKEAYKRDK PHVNIGTIGH VDHGKTTLTA AITSVLAKAG NAEMREFGDI DKAPEERERG 
ITISTAHVEY QTEKRHYAHI DCPGHADYIK NMITGAAQMD GAILVVAGTD GPMPQTREHI
LLARQVNVPA LVVFLNKVDI ADPELLELVE LELRELLTEY DFPGDDIPII KGSALKALEG
DAEAEKAIME LMDAVDDYIP EPVRDVDKPF LMPVEDVFSI SGRGTVGTGR IERGVVKINE
EVELVGIKPT KKTVVTGIEM FQKILDQGQA GDNAGLLFRG VGKDEIERGM VVAKPGTITP
HTKFKAEVYI LKKEEGGRHT PFFNNYRPQF YFRTTDVTGA VTLPEGVEMV MPGDNLSIEV
ELIVPIAMDE NLRFAIREGG RTVGAGTVTQ IIE