Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2298 |
Symbol | |
ID | 6375993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2467366 |
End bp | 2468547 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642684785 |
Product | elongation factor Tu |
Protein accession | YP_001960683 |
Protein GI | 189501213 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0189687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00385898 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAAAAG AGGCATACAA GAGGGATAAG CCCCATGTCA ATATTGGTAC CATTGGTCAC GTTGATCATG GTAAGACAAC GCTTACAGCA GCAATAACAT CCGTGCTGGC AAAAGCAGGA AATGCAGAGA TGCGTGAATT CGGAGATATC GACAAAGCTC CTGAAGAGAG AGAGCGCGGT ATTACGATTT CGACAGCTCA CGTTGAGTAC CAGACAGAAA AGCGTCACTA TGCGCATATC GACTGTCCCG GTCACGCTGA CTATATCAAG AATATGATTA CCGGTGCGGC GCAGATGGAT GGTGCGATTC TGGTTGTCGC GGGTACAGAC GGTCCTATGC CGCAGACTCG TGAACACATT CTGCTTGCCC GTCAGGTGAA TGTTCCTGCT CTTGTTGTGT TTCTGAACAA GGTGGATATC GCGGATCCTG AACTTCTCGA GCTGGTTGAG CTTGAGCTTC GTGAACTGCT TACAGAGTAT GATTTTCCTG GTGACGATAT TCCGATCATC AAAGGTTCCG CGTTGAAGGC TCTCGAAGGC GACGCTGAGG CCGAAAAGGC CATCATGGAG CTTATGGATG CAGTTGATGA CTATATTCCT GAGCCGGTTC GCGACGTCGA CAAACCGTTT TTGATGCCTG TTGAAGATGT CTTCTCTATT TCCGGTCGCG GTACTGTCGG TACCGGACGT ATCGAGAGAG GCGTTGTCAA GATAAACGAA GAGGTCGAGC TTGTCGGTAT CAAGCCTACC AAGAAAACAG TTGTAACCGG CATCGAGATG TTCCAGAAGA TCCTCGATCA GGGTCAGGCC GGTGATAACG CGGGTCTTCT TTTCAGAGGA GTCGGTAAGG ATGAGATCGA GAGAGGTATG GTTGTCGCCA AGCCGGGAAC GATTACTCCG CACACCAAGT TCAAGGCCGA GGTCTACATT CTGAAAAAGG AAGAGGGTGG CCGTCATACA CCGTTTTTCA ACAACTACCG CCCGCAGTTC TATTTCAGGA CCACTGATGT GACCGGTGCT GTAACACTGC CTGAAGGTGT CGAGATGGTT ATGCCTGGTG ATAATCTGTC GATCGAGGTT GAATTGATCG TTCCGATCGC CATGGATGAG AATCTGAGGT TTGCTATCCG TGAGGGTGGA CGTACTGTCG GTGCAGGAAC GGTAACCCAG ATTATCGAGT AA
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Protein sequence | MAKEAYKRDK PHVNIGTIGH VDHGKTTLTA AITSVLAKAG NAEMREFGDI DKAPEERERG ITISTAHVEY QTEKRHYAHI DCPGHADYIK NMITGAAQMD GAILVVAGTD GPMPQTREHI LLARQVNVPA LVVFLNKVDI ADPELLELVE LELRELLTEY DFPGDDIPII KGSALKALEG DAEAEKAIME LMDAVDDYIP EPVRDVDKPF LMPVEDVFSI SGRGTVGTGR IERGVVKINE EVELVGIKPT KKTVVTGIEM FQKILDQGQA GDNAGLLFRG VGKDEIERGM VVAKPGTITP HTKFKAEVYI LKKEEGGRHT PFFNNYRPQF YFRTTDVTGA VTLPEGVEMV MPGDNLSIEV ELIVPIAMDE NLRFAIREGG RTVGAGTVTQ IIE
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