| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2270 |
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| Symbol | rpsD |
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| ID | 6375964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 2453328 |
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| End bp | 2453939 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642684756 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_001960655 |
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| Protein GI | 189501185 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0573155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0031746 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCACGAT TCAGAGGTTC AATAACGAAA GTATCAAGAC GGTTAGGGGT CGCTCTTTCG
CCTAAGGCTG AAAAATATCT TGAAAAACGT CCCTATGCAC CTGGTGAGCA TGGACAGTCA
AGAAGAGGAA AAGTTTCCGA GTATGCTCTG CAGCTTCGGG AAAAGCAGAA GATGAAATAT
CTGTACGGTG TGCTGGAAAA GCAGTTCAGG AATTACTACA AAAAGGCTGT TTCACAGCGT
GGCATTACAG GTGATAACCT TGTGAAGCTT CTTGAAAGAC GTTTTGACAA CGTTGTTTTT
CGCGCAGGTT TTTCACCTTC CAGAGCAGGC GCACGGCAGC TTGTTACCCA TGGACATCTT
CTGATAAACG GAAAGAAAGT CGATATACCT TCATATTTGT TGAAGCCGGG CGATGCAATG
GAGTTCAGGC AGAAAAGCCA GAACCTCGAT GCGGTAGCTG ACTCTATGAA CAGAGCGCCG
GATTCACGCA TTCCATCATG GATCCAGGTA GACAAGGCGC ATAAGAAAGC GGTTTTTCTT
GCGGTGCCTG AGCGGGAAGA AGTACAGGAG CCGTTTAACG AACAGCTGGT TGTCGAGTTG
TACTCCAAGT GA
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| Protein sequence | MARFRGSITK VSRRLGVALS PKAEKYLEKR PYAPGEHGQS RRGKVSEYAL QLREKQKMKY
LYGVLEKQFR NYYKKAVSQR GITGDNLVKL LERRFDNVVF RAGFSPSRAG ARQLVTHGHL
LINGKKVDIP SYLLKPGDAM EFRQKSQNLD AVADSMNRAP DSRIPSWIQV DKAHKKAVFL
AVPEREEVQE PFNEQLVVEL YSK
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