Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2212 |
Symbol | |
ID | 6375906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2399524 |
End bp | 2400795 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642684699 |
Product | membrane protein |
Protein accession | YP_001960598 |
Protein GI | 189501128 |
COG category | [S] Function unknown |
COG ID | [COG3174] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.469144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAC TTATGGACCT GTCAGTCTGG CAGATACTCG GGATTTCTCT GGGCCTCGGA CTTCTTGTCG GGCTTCAGCG TGAATGGTCC AAGGCAGAAG GCGCCGGGAT CCGTACCTAT CCGATGATAA CTGTTTTTGG AACAGTCTGC GCTATGCTGG CGGAGCGCTT CGGGGGCGGA ATTTTGCTTG GGGGTATCAT CGCGTTAGGC GCTATGATGG TCGTTATGAA AATCATGATG AACATCAATC TTCCCTCTTC GGAGCATCCG CATGCAGGGC CTACAACCGG AATCGCCGCA CTGCTCATGT ATGCCGTGGG CGCGATGCTT GCAATGGGAA GTATTGTGCC GGCCATGGCA ATAGGCGGCG GGGTGGCTGT TCTTCTCCAG TGGAAACAGC CCTTACACGG TTTTGTCAAG CGTATCGGAA ATGATGATAT GCAGGCGATA TTTCGACTTG TACTCTTGGC CATGGTTGTT CTTCCTGTGC TTCCTGACAA AAATTACGGC CCGTACGGTG TGCTGAATCC TTCGCACATA TGGATGATGG TTGTGCTGAT TGTCGGTATC AGTGTCGGCA GCTATCTTGT CGCACGGTTT ATGGGCGCAA AGGCGGGTTC ACTGCTCGGA GGTTTTCTTG GGGGCCTTAT TTCAAGTACC GCTACCACGA TCAGCTATGC ACGCAGGTCG AAAACAGCTC CGGGAACATC TTCGCTGGCG GCAATGGTGA TCATGATCGC TTCTTCTATT GTCTTTATCC GTGTGACATT TGAAATTGCT GTCGTCGCTC CCGGAGTTCT TCCTTATATC CTTCCCCAGT TTTCTGTCAT GTTCCTGTTT ATGGCACTCA TTGCCGCAGT TGCCTGGTTC TTCTCCAGGA GCAGCGGGAA GGAACTGCCT GAAGCTGAAG ATCCGTCAGA TCTGGGTGCT GCCGTTGCCT TCGGGGCACT CTATGCGCTT GTGCTGGTAG CTGTAGCCGC CGCAAAAGAG TATTTCGGCG ATCAGGGGCT CTATGTTGTA GCTGCTCTGT CCGGATTGAC CGATATGGAT GCGATCACGC TCTCAACAGC ACGCTTGATA GAGGCTGAGA GGATAGAAGC CGATACCGGC TGGCGAATGA TGATGCTTGG CGCTCTGTCC AACATCCTGT TTAAAGCAGG AGCAGTTGCA GTATTGGGGG AGAGGAAGCT TTTTGTTTCC ATCGCGCTGC TTTTCGGTCT TTCGCTTGCC GGAGGAGCCG CGCTCTTGTG GTTATGGCCG TATGTCGGGT AA
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Protein sequence | MIELMDLSVW QILGISLGLG LLVGLQREWS KAEGAGIRTY PMITVFGTVC AMLAERFGGG ILLGGIIALG AMMVVMKIMM NINLPSSEHP HAGPTTGIAA LLMYAVGAML AMGSIVPAMA IGGGVAVLLQ WKQPLHGFVK RIGNDDMQAI FRLVLLAMVV LPVLPDKNYG PYGVLNPSHI WMMVVLIVGI SVGSYLVARF MGAKAGSLLG GFLGGLISST ATTISYARRS KTAPGTSSLA AMVIMIASSI VFIRVTFEIA VVAPGVLPYI LPQFSVMFLF MALIAAVAWF FSRSSGKELP EAEDPSDLGA AVAFGALYAL VLVAVAAAKE YFGDQGLYVV AALSGLTDMD AITLSTARLI EAERIEADTG WRMMMLGALS NILFKAGAVA VLGERKLFVS IALLFGLSLA GGAALLWLWP YVG
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