Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2202 |
Symbol | |
ID | 6375896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2380780 |
End bp | 2381775 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642684689 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001960588 |
Protein GI | 189501118 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.633416 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGACGTA ACATTCTTGT TACCGGCGCG ACAGGTTTCA TCGGCGCTGT TGTTGTCGAT TATCTTAAAG GCAGAGGCGA CAGCGTCAGG GTATTGACAA GGCCGGAAAG CAATCCCGGA AAAGCTTTGT CAATGCAGGT GGATATTTTG AAGGGCAGGT ATGACGATCC TGTTTCACTC AGGAAGGCCG TGGAAGGAAT GGACATGGTT TTCCATCTCG CAGGTGTGAC AAAATCAGTG GATGAAAAGG GTTTCTATGA CGGGAATGTT CTTCCGGTAA AAAACCTGCT TGAAACCGTT CTGCAGGTGA ATCCGGGACT GAAGCGTTTT CTGCTGGTCT CTTCTCTTGC AGCGGCAGGT CCGGCTGATA ATCCCGATCC GGGCTCAAGG GAAGAAGATG ATTCGAAGCC GGTCAGTGTT TACGGCGAAA GCAAGCTCGA GGCTGAGAAG ATCTGTCTCT CGTTCAGGGA TCGTCTGCCG GTAACCATTG TAAGGCCGCC TGCGGTCTAT GGACCGGGAG ACAGGGATGT ACTGCAGTTT ATCCGGATGC TGCAAAAAGG TCTTGTGCTT GGGGCGGGCG ATGTCAAAAA ACAGCGTTTA AGCCTTGTGC ATGTCGATGA TCTGGTTCGC GGTATGGTCA TGGCTACTGA ATCGCCGGCA GGGAGAGGCG AAATATATTA TATAACATCG CCGAAAGGTT ATTCATGGGA GGAGCTTTCG GCTGCCGCCG CCCGAGAACT CGGGGTAAAA CATATGCTCA GGATCTCTCT TCCGAAATCG TTGATGCAGA TGTTGGGATA TGTGGCGGGT TCGATCAGCT CGGTTACCGG TCGCTCAGGG TTTTTAAATC CTGACAAGGT CAGCGAGATG GTTCAGGACT ACTGGGTTTG TTCACCCCGG AAAGCGGAAA AGCAGCTCGG GTTTACCGCT GCAGTATCTT TGGAAGATGG CATGCATACG ACTATAGCCT GGTACAGGGA GAAGGGATGG TTGTAA
|
Protein sequence | MGRNILVTGA TGFIGAVVVD YLKGRGDSVR VLTRPESNPG KALSMQVDIL KGRYDDPVSL RKAVEGMDMV FHLAGVTKSV DEKGFYDGNV LPVKNLLETV LQVNPGLKRF LLVSSLAAAG PADNPDPGSR EEDDSKPVSV YGESKLEAEK ICLSFRDRLP VTIVRPPAVY GPGDRDVLQF IRMLQKGLVL GAGDVKKQRL SLVHVDDLVR GMVMATESPA GRGEIYYITS PKGYSWEELS AAAARELGVK HMLRISLPKS LMQMLGYVAG SISSVTGRSG FLNPDKVSEM VQDYWVCSPR KAEKQLGFTA AVSLEDGMHT TIAWYREKGW L
|
| |