| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2135 |
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| Symbol | |
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| ID | 6375829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 2311622 |
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| End bp | 2312305 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642684625 |
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| Product | surface antigen msp4 family protein |
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| Protein accession | YP_001960524 |
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| Protein GI | 189501054 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.704163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0230075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAGG CACTTTCCCT ACTGGCCGCA GCCGTCCTTA TTATGGGCTG GTCAATACCT
TCCTATGCAG GCAATCCCTA CGCTTCCGGT AACATCGGTA TCGTATGGTT CGATAATCTC
AATGGAGTCG AATCAGATTA TGAAAATAGA GATTACTCCA TCGATGCCTC ATTAGACTCA
GGCATTTCAC TGACTGGTGC AGTAGGTTGC GATATGGGAG ATACAAGAGT TGAAGCTGAG
ATAGGGTATC AGACAAATGA TGCCGTATCA GCCGAAGTTC TTGATGACAA TGGAATTCTT
GAAGATGGCC CCTGGGAATG GGGTGGTGAT GTTTCGCTAA CAACGTTCAT GTTCAACGGC
TACTACGACA TCGCACTTAT GGAATCCGGC CTTGAGTTCT TCCTTACTGC AGGTGTAGGC
GGAGCTTTCT ATTCCTTCGA TGATGTTGGT GACATAAACG ATGATCGTTA CAGGGGTACT
ACCAACGGAA GCACCTGGGC ATATCAGCTT GGAGCCGGAC TTGCTCTTCC TGTTGGCGAC
AACCTCATCG TTGATGCCCG CTACCGTTAT TTCGATACCG CTGAATTCAC GACAGAGGAC
GATTTTGACG CCTTTGATGA TGTAGCGATG AACCTCGATA TCAGCAGCCA TTCTGCTCTT
GTCGGTTTGC GTTACAACTT CTGA
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| Protein sequence | MKKALSLLAA AVLIMGWSIP SYAGNPYASG NIGIVWFDNL NGVESDYENR DYSIDASLDS
GISLTGAVGC DMGDTRVEAE IGYQTNDAVS AEVLDDNGIL EDGPWEWGGD VSLTTFMFNG
YYDIALMESG LEFFLTAGVG GAFYSFDDVG DINDDRYRGT TNGSTWAYQL GAGLALPVGD
NLIVDARYRY FDTAEFTTED DFDAFDDVAM NLDISSHSAL VGLRYNF
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