Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2123 |
Symbol | |
ID | 6375817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 2299058 |
End bp | 2301487 |
Gene Length | 2430 bp |
Protein Length | 809 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642684613 |
Product | peptidase S16 lon domain protein |
Protein accession | YP_001960512 |
Protein GI | 189501042 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1067] Predicted ATP-dependent protease |
TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00311978 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCCATAC CTGAACCGCT CGAACCCCGG CAGCTCTATA CCACCTGCGA CCCCCAAAGT TTTTCCTTCA CAAGCACCGC TGATCTTGAC GGAGAAATCA AAATATCCGG TCAGGAAAGA GCCAGAGAGG CAATACGGTT CGGTGTCGGA ATGAAACAAA GCGGCTTCAA CCTGTTTGCT CTGGGGCCGT CAGGAACAGG CAAACAAACC GCTCTTGAAC AGTACCTCCA GGATATTGCC CCTCATGAAC CGGTTCCCGA TGACTGGTGC TATGTCTACA ATTTTGAAAA TTCACGACAA CCGAATGCAA TCGCGTTGCC TGCCGGAAAA GCGTGCCGTT TCAGCCATGA AATGAAAGAG CTTGTCGAGG GACTGTTTTC TACCATACCC GGCGCTTTCA GCAGCGAAGA ATACCAGGAA CAGGAAAAAG TCATCAAGGA ACAGTTCAGT GAGCAGCAGG CATCGGCAAT TGAGGAACTT GAAAAAAAAG CTGCCGAGCA TGACATAGCG CTGATCAGGA CCCCTTCCGG CTTTGCTTTT GCTCCTTTAA AAAAAGGCGA AGTGCTCAAT GCAGAAGCTT TTATGCGCCT CAAAGAGGCA GAAAGAAATG CCATTGAAAA AGAGATCGCC AACTTGAAGG GAGCCATGCA GAGCATTATG ATGCAGATCC CGAAGTTGCA GAGGGAAACA CAGGCAAAGC TTAAAGAGCT CAATCAGCAG GTTGCGAGCT TTGCCGTAAA GCCTCTTTTC GCCGAGCTGA AAAACAGCTA TCAGGATCAA CCGGCAGTGG CGCTCTATCT TGATGCTGTG GAAAAAGATG TGGTCGAAAA CTTCAACCAG TTCCTTGAAA AAGAGTCATC TTCACCAATG ATGCCCATCG GCCCTGGAGA ACTGAAAAAC AAGGCAAGCC AGCAGCTCCA TCGTTATAGC GTCAATGTCA TTATCGATAA CAGCAAAACG AAAGGCGCTC CGGTTATCTA TGAGGACAAG CCGTCTACCC AGAACCTGGT GGGGGATATC GAACACCTTG CACAGATGGG AATGCTTGTC ACCGACTTCA CGCTGATTAA ATCCGGAGCC CTTCACCGCG CAAATGGAGG GTACCTTATC CTCGACGCCA GGCGTCTTCT GCTGGAACCA CTCGCCTATG AAGCGCTCAA GAAAGCGATA CGAACCCGGC AGATCCGCAT CGAATCACTG GCACAGCTCT ATGGAATGGC AAGCACTGTC TCCCTTGACC CGGAGCCTGT ACCTCTCAAC ACCAAAATCA TTCTTCTCGG TGAAAGAAGA CTCTACTATA TCCTCAGTTC CCATGATCCT GATTTTAACG AACTTTTTAA AGTTGCCGCA GACTTCGACG ATGAAATGGA TCGGAACGAA GAAAGTCACC TCTCCTATGC GGGCTTTATC AGCTCTATCG TCCGTCGGGA AAAACTGCGG CACCTCGACA AATATGCCGT AGCGCGTATG ACGGAATACG GAGCAAGGCT CTCAGGTGAT TCAGAAAAGC TCTCCACGCA CATACAAAGC ATCACCGATC TGATACATGA ATCGAACTTC TATGCCGCGG AAAATGATCA CGAGCTGATT ACCCCGGATG ATGTAAAACA GGCTATAGAA GCGAGAAAAT ACCGGGCCGG ACGCATCCCC GGAAAAATTC AGGAGGCGAT ACTCCGGAAC ACCATACTCA TTGATACAGA GTCGGAAAAA GTAGGACAGA TCAACGGACT GGCAGTCTAT ATCCTCGGAG ATCAGAGTTT CGGAAAACCA AGCCGCATTA CCGCGAGTAT CAAGCTGGGA AAAGGTGAGG TTGTGGACAT CGAGCGAGAA GTTGAAATGG GCGGACCGAT CCACTCGAAA GGGGTGATGA TTCTTTCAGG ATTTCTTGGC GGAAGGTTTG GAGAGCAACA GCCGCTTTCG CTTTCTGCCT CCCTTGTATT TGAACAGTCC TACGGCGGGG TTGACGGTGA CAGCGCCTCA TCTGCCGAGC TTTACGCCCT GCTCTCAGCC ATTTCAGGCA AACCGATACA ACAGAGTTTT GCCGTAACCG GCTCAGTCAA TCAATACGGA GAAGTACAGG CTATCGGCGG AGTAAACGAA AAAATCGAGG GTTTTTTCGA TCTCTGTCAA CAACGGGGAC TTTCGGGCAA ACAAGGTGTT CTTATACCCG CGTCCAACGT AAGAAACCTC ATGCTCAGGG AAGATATTGT CGCGGCTGTC ACTGAAGGAA AGTTCTCCAT CTATCCCGTT ACACACGTTG ATGAAGGCAT AGAGATCCTC ACGGGAGTAC CGGCAGGCGA AAAACTGGAT GACGGCAGGT ATCCCGAAGG CACGATCAAC GGCCTTGCCG TAGCAAAACT TATAGCGATG TCCGAAAAAC AGAAAAAGTA TTCCTCAAAA ACGGACAACG ACAAAACCCC GGAGGAATGA
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Protein sequence | MPIPEPLEPR QLYTTCDPQS FSFTSTADLD GEIKISGQER AREAIRFGVG MKQSGFNLFA LGPSGTGKQT ALEQYLQDIA PHEPVPDDWC YVYNFENSRQ PNAIALPAGK ACRFSHEMKE LVEGLFSTIP GAFSSEEYQE QEKVIKEQFS EQQASAIEEL EKKAAEHDIA LIRTPSGFAF APLKKGEVLN AEAFMRLKEA ERNAIEKEIA NLKGAMQSIM MQIPKLQRET QAKLKELNQQ VASFAVKPLF AELKNSYQDQ PAVALYLDAV EKDVVENFNQ FLEKESSSPM MPIGPGELKN KASQQLHRYS VNVIIDNSKT KGAPVIYEDK PSTQNLVGDI EHLAQMGMLV TDFTLIKSGA LHRANGGYLI LDARRLLLEP LAYEALKKAI RTRQIRIESL AQLYGMASTV SLDPEPVPLN TKIILLGERR LYYILSSHDP DFNELFKVAA DFDDEMDRNE ESHLSYAGFI SSIVRREKLR HLDKYAVARM TEYGARLSGD SEKLSTHIQS ITDLIHESNF YAAENDHELI TPDDVKQAIE ARKYRAGRIP GKIQEAILRN TILIDTESEK VGQINGLAVY ILGDQSFGKP SRITASIKLG KGEVVDIERE VEMGGPIHSK GVMILSGFLG GRFGEQQPLS LSASLVFEQS YGGVDGDSAS SAELYALLSA ISGKPIQQSF AVTGSVNQYG EVQAIGGVNE KIEGFFDLCQ QRGLSGKQGV LIPASNVRNL MLREDIVAAV TEGKFSIYPV THVDEGIEIL TGVPAGEKLD DGRYPEGTIN GLAVAKLIAM SEKQKKYSSK TDNDKTPEE
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