| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2106 |
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| Symbol | |
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| ID | 6375800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 2278383 |
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| End bp | 2281364 |
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| Gene Length | 2982 bp |
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| Protein Length | 993 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642684597 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001960496 |
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| Protein GI | 189501026 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.295041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAGAA AAAATCTTTC ATACAGTGAG CTTGAGCGAC AGCTTGTTCT TCTGCGGCAT
CAGGTGCTCG AAAGCAAAAA GATCGAGCAG GAGTTGCTTG ATAAACAGAA CGCTCTTCGG
GAACAGAATA TCAATCTGAT CAGAAAGTCC ATTGAATTGT CTGATTTGAG GCGGCAGCTC
GAAGACAAAA ACTACGAGCT TGAACTCTCC TCGGAAAAAC TAGATACCAC CCTCAGATCT
CTTCGGGAAA GTGAAAATAC CCTGAGTTCC ATTTTGTCGA ACAGTCCTGA TACCATCGTT
GCCGTTGATG ATTCGCACAG AATCATATAC ATGAACAGAA GCATGCCGGG GCACCAATCG
GAAATATCGG TTGGTAAACA TTTCTGTGAG CATATCACAG CGGAGCGGCA TGACATCTAT
CATACGACTA TTGAACAGGT ATTCAGAACC GGAATGCCTG CCAAACTTGA AAGTACGGTC
GTCCAGCAAA ACGGCCGGAG TGTTGATTTT GAGTCCCGTT TCGGACCATG TATGCAGGAA
GGTGCGATTA CCTCTGTGGT GATGATATCC ACCGACATAT CTGAAAGAAA AAGAATTGAA
AAAGAGCTCA AGCGTTCCCT TGATGATCTG GAACGTTTCA ACCGTTTCAT GGTTGGGAGG
GAACAGACAA ATCTGGAGCT CAAGGAAGAG GTCAATCGTT TATGTGAAGA ACTGGGCAGA
CCTCCTCGAT ATGCTGTAAG AAGAGCCGGG AATGGTGATG TTTATGTGCC TTTGAATTCC
CGGGAGGGTA TCCGGCCAGA TTCAGCGGTC AATGAGCATG ACCATAAGAG GGTATGGAAA
GAACCGGATC AGGAGTCGCT CAAGCAAAGG CAGCGAGAGG CGCTCATAAA CCTTGTTGAA
GATGCAAACA GGGCGAGAAA CGAGCTAATG AATGCCAACA GAAAGCTTGA AGCGTCGATT
GCCAGAGCCA ATACCATGGC ATCTGAAGCT GACGCGGCAA ACAAGGCGAA AAGCGAATTC
CTTGCAAATA TGAGCCATGA AATCCGTACT CCGATGAACG GTGTTATCGG TATGTCTGAA
CTGTTGTTGA GATCAACGCT TGATAAAGAG CAGAAAAAGT TCGCCGAGAC GATTAATGCC
AGTGGAAAAA ACCTCCTTCA TCTGCTCAAT GATATCCTGG ATTTTTCAAA GATTGAAGCT
GATAAACTTG AAATTGAAGA GATTGATTTT AACCTGCTCG ATCTGCTCGA TGAAATCATA
AATATGTTTT CCTATAAAGC CGGGAAAAAA GGGCTCAATT TTACGTTTCT GCCCGATGAA
GATATTCCGC TCCTTTTACG GGGGGATCCG GGTCGCATCA AGCAGATACT GGTTAATCTA
ATCAGCAATG CCATCAAGTT TACCGATGAG GGGGAAATCC TCGTTAACGT GGAGCTCGAG
GAAGATTTTG GGGATAACGC ACGCATCCGT TTCACGGTAT CCGATACAGG CATCGGCATC
GATGAGAGCC GAATGGATGC GATTTTTGAA CCTTTTGTGC AGGCTGATGG TTCAACTATC
AGGAAATACG GAGGCACAGG CCTCGGGCTG TCGATTTCCA ACAAGCTTGC CAGGAATATG
GGTGGCCGGA TACAGGTGAG GAGTACTCCC TCTCAAGGTT CTATGTTCTA TTTTTCAATT
GACTTTATAA AACAGCAACA TCCTGATCAA ATCTATGCAG ATATCTCGAT CCCGCTGACA
GGATTCAACG TTCTTCTCAT CGAGCCCTGT CAGGCATCGA GAAAGCTGAT AAAAATATTT
TTTTCGCTAT GGAACAGCTG TTTTGAGGAA GCCTCTGACT GGGAATCAGG TGTAAAGAAA
TTACAGAAGG CGGCAGAGAG CGGTGTACTC CCGGATATTG TTCTTATCGC TTTACCGGAG
GAGCGGCGTG ATGAGGTTTT TGAAAAATTC AGGACCGGAG ATTTGCTTGA AAACGTCATT
GTTATCGGTC TCACATCTGC AGGGCGCGGC GCCGATTTTC AGCCGGATCC ACTGGGGAAA
CCGGATGCAT GCCTGGAAAA ACCGATAAGG GGCAAGGAGC TCTATGCATG TGTGGCTGAT
CTTCTGAAAA GGAGAGGATC GACACCTGAA CTGCTGGAGA AGAACAAAAT ACCTGTCCAC
AGTGTTACGG AAAAAGAGAG ACGGCATTTC AGAATACTGC TTGTAGAAGA CAGTGAGGTC
AATCAACTTG TGCTGCTGTC CATGCTCCAG AAAGAGGGAT ATGAGGCAGA CGTTGTTCAG
AACGGCACTG AAGCGCTTGT GGCTCTGGCA AAGGTTCACT ATGATCTCGT ACTGATGGAT
TGCCAGATGC CCGAGATGGA TGGATACGAG GCGACGAGAT GTATAAGGCG GGGGCAGGGT
AATGTTATGA ATCCGGAAGT ACCGATTGTC GCTATTACCG CCAATGCCAT GACGGGAGAT
CGAGAGAGAT GTCTTCAGGC CGGAATGGAT GATTATATGG CAAAACCGGT GAGAATGTCC
GATTTTACGG CGATGCTGGA GAAATATTCC GGGGAAAAGC TGTCGTCGTC TGTTTCTGAT
GATAATGAAA GTAACCCCAA ACGAGTGGAC AGTATGAGTA TGGATAGCTC GATTTTTCAG
GAAACGGAGA TGCTGGGCAG ACTACAGCAT GACAGAGATG TAGCGAGAGT GATCATAGAA
AATTTTCTTG AAGATACACC TCAGCAGATT ATCCGTTTGA AAAAAGCGAT CAGTGAGCGT
ACAAGCGAAG AGAGTTTTCT GACGGCTCAT GCCATAAAAG GTGCGGCACT GCTGGTCGGT
GGCTGGAAAT TATCAAAAGT CGCGCAGCAG ATTGAGAATG CGGCCAGAGA GGGAGACCTG
TCACAGGCGG GGCAATTGCT GACGGATATC GAAGAGCAGT TTTTCGCATT GAAGGGCTGC
ATGGCAGGAG CAGGATGGAT TCAGAAACTG GAACCCGAAT AG
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| Protein sequence | MERKNLSYSE LERQLVLLRH QVLESKKIEQ ELLDKQNALR EQNINLIRKS IELSDLRRQL
EDKNYELELS SEKLDTTLRS LRESENTLSS ILSNSPDTIV AVDDSHRIIY MNRSMPGHQS
EISVGKHFCE HITAERHDIY HTTIEQVFRT GMPAKLESTV VQQNGRSVDF ESRFGPCMQE
GAITSVVMIS TDISERKRIE KELKRSLDDL ERFNRFMVGR EQTNLELKEE VNRLCEELGR
PPRYAVRRAG NGDVYVPLNS REGIRPDSAV NEHDHKRVWK EPDQESLKQR QREALINLVE
DANRARNELM NANRKLEASI ARANTMASEA DAANKAKSEF LANMSHEIRT PMNGVIGMSE
LLLRSTLDKE QKKFAETINA SGKNLLHLLN DILDFSKIEA DKLEIEEIDF NLLDLLDEII
NMFSYKAGKK GLNFTFLPDE DIPLLLRGDP GRIKQILVNL ISNAIKFTDE GEILVNVELE
EDFGDNARIR FTVSDTGIGI DESRMDAIFE PFVQADGSTI RKYGGTGLGL SISNKLARNM
GGRIQVRSTP SQGSMFYFSI DFIKQQHPDQ IYADISIPLT GFNVLLIEPC QASRKLIKIF
FSLWNSCFEE ASDWESGVKK LQKAAESGVL PDIVLIALPE ERRDEVFEKF RTGDLLENVI
VIGLTSAGRG ADFQPDPLGK PDACLEKPIR GKELYACVAD LLKRRGSTPE LLEKNKIPVH
SVTEKERRHF RILLVEDSEV NQLVLLSMLQ KEGYEADVVQ NGTEALVALA KVHYDLVLMD
CQMPEMDGYE ATRCIRRGQG NVMNPEVPIV AITANAMTGD RERCLQAGMD DYMAKPVRMS
DFTAMLEKYS GEKLSSSVSD DNESNPKRVD SMSMDSSIFQ ETEMLGRLQH DRDVARVIIE
NFLEDTPQQI IRLKKAISER TSEESFLTAH AIKGAALLVG GWKLSKVAQQ IENAAREGDL
SQAGQLLTDI EEQFFALKGC MAGAGWIQKL EPE
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