| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2023 |
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| Symbol | |
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| ID | 6375716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 2176697 |
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| End bp | 2177260 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642684514 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001960414 |
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| Protein GI | 189500944 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.665741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.869796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGCATT ACAAAAGAGT CTTTCCGTTT TTTCTACTGA TACTCTGCTT TGGTTTTAGC
GCATGCGGCC CGAACGCCAA GGATCTTAAC ACTTCCGGAA TAGAGAAACT GAAAAATGAA
GACTATGAAG GAGCGCTGGA AGACTTTACC AAAGCTGTTG AAAAAGACCC TGAATTTGCA
GAATCATATC TCAATCGCGG ATTTGTCTAT GGTAACAGGG GCGAGCTCCA GGAGGCTCTG
GCGGATTTCA ACAAGGCCAT AGAAATGGAC TCAGGCTATG TCGAAGCATA CTATAACCGG
GGATTTATTT ACGGTTTTTT TGAAGAGTTT GATAAAGCGG TGGCAGATTT CGACAAGGTT
ATCGAGCTGA ATCCTAAAGA TGCCGAAGCC TATATCAACC GGGCGCTGAT CCGTTCAAGG
ATCGGGGACA GAGAGGGGGA ACTTGCCGAT CTGAAAAAAG CGGCGGCTCT GGGTGATCCG
ACCGCACGTA ACTGGCTTGA TGACAATGGT GTGGAATGGG AGGACGCGGG AAAGAGTTCT
GATTCTGCTG AGAATCCGGA ATAA
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| Protein sequence | MMHYKRVFPF FLLILCFGFS ACGPNAKDLN TSGIEKLKNE DYEGALEDFT KAVEKDPEFA
ESYLNRGFVY GNRGELQEAL ADFNKAIEMD SGYVEAYYNR GFIYGFFEEF DKAVADFDKV
IELNPKDAEA YINRALIRSR IGDREGELAD LKKAAALGDP TARNWLDDNG VEWEDAGKSS
DSAENPE
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