Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1889 |
Symbol | |
ID | 6375581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2052887 |
End bp | 2053924 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642684386 |
Product | dTDP-glucose 4,6-dehydratase |
Protein accession | YP_001960287 |
Protein GI | 189500817 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0868281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00930049 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCACATTC TCATCACCGG GGGGGCGGGG TTTATCGGAT CGCATGTGGT GCGGTATTTT GTCGATACCT ACCCGGAATA CAGCATCACC AATCTTGACA AATTGACCTA CGCGGGTAAT CTGGAGAACC TGCGGGATGT GGAGGATCGT TCGAATTACC GCTTTGTCAG GGGTGATATT ACCGATGGCG CAGTCATGCT GGAGCTTTTT GAAAAAGAGC TTTTTGACGG CGTGATCCAT CTTGCCGCCG AGTCGCACGT CGATCGTTCG ATTGCCAATC CGACCGGGTT TGTCATGACC AATGTGCTGG GTACGGTGAA TCTGTTGAAC GCGGCAAGAG CACTCTGGCA AGACGACTAC AGCGGAAAAC TTTTCTACCA TGTCTCGACC GATGAGGTCT ATGGTGCCTT GGGTGGCGAG GGCATGTTTA CCGAAGAGAC CTCTTACGAT CCGCACAGCC CGTATTCAGC GTCCAAAGCC TCTTCGGATC ATTTTGTCCG TGCGTATCAC GATACCTACG GACTGCCTGT GGTGATCAGC AATTGCTCGA ACAACTACGG ACCGTGTCAG TTTCCGGAAA AGCTGATCCC GCTGTTCATC AATAACATCA GGAACAACAA GCCGCTTCCT GTTTACGGAA AAGGAGAGAA CGTCCGGGAC TGGTTGTGGG TCATCGATCA CGCCCGGGCG ATCGACATGA TTTATCACAA GGGAAAGCAG GGGGAGACCT ACAATATCGG GGGAAACAAC GAGTGGACGA ACATCGCGCT GATCAGACTG CTCTGCAGTA TCATGGACCG GAAGCTCGGT CGCCCGGAAG GAGAATCCGG GAAATTGATC ACCTGTGTGA CCGATCGGGC AGGCCACGAT TTCCGCTACG CGATCGACTC CTCAAAACTT CAGCGGGAAC TGGGATGGAC ACCTTCGCTT CAGTTTGAAG AGGGACTGGA GAAGACGGTG GACTGGTATC TGGAGAACAG CACCTGGCTC GATCATATCG CCTCGGGGGA GTATTTGAAG AGAGTGACTA ATGAGTAA
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Protein sequence | MHILITGGAG FIGSHVVRYF VDTYPEYSIT NLDKLTYAGN LENLRDVEDR SNYRFVRGDI TDGAVMLELF EKELFDGVIH LAAESHVDRS IANPTGFVMT NVLGTVNLLN AARALWQDDY SGKLFYHVST DEVYGALGGE GMFTEETSYD PHSPYSASKA SSDHFVRAYH DTYGLPVVIS NCSNNYGPCQ FPEKLIPLFI NNIRNNKPLP VYGKGENVRD WLWVIDHARA IDMIYHKGKQ GETYNIGGNN EWTNIALIRL LCSIMDRKLG RPEGESGKLI TCVTDRAGHD FRYAIDSSKL QRELGWTPSL QFEEGLEKTV DWYLENSTWL DHIASGEYLK RVTNE
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