Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1869 |
Symbol | |
ID | 6375560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 2026298 |
End bp | 2027146 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642684365 |
Product | undecaprenyl pyrophosphate phosphatase |
Protein accession | YP_001960267 |
Protein GI | 189500797 |
COG category | [V] Defense mechanisms |
COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0119311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCTTT TTGAAGCAAT CATTCTCGGC ATCGTTCAAG GTCTCACAGA GTTTCTTCCC ATCAGCAGCA CGGCACACCT TCGCATAGTA CCGGCTCTCG CCGGGTGGCA GGACCCGGGA GCAGCATTTT CTGCAATTGT GCAGATAGGC ACGCTTGCGG CTGTCCTGAT CTATTTCTAC AAGGATATCC ACTCCATCAC CAGAGGAGTT TTCGACGGCC TCCGTTCAGG CAGGCCTTTT GAAACACAGG AATCCCGAAT GGGCTGGATG ATTGCCGCCG GCACGATGCC GATCGTCATT CTGGGCCTGC TCTTCAAGAC CGAGATAGAA ACCAGCCTGC GTTCACTCTA CTGGATCAGT GTCGCGCTTA TTGTTCTGGC GCTCATGCTC ACCCTTGCCG AATGGCTGAT GAAACGGCGG GCCGATAAAG GCCTGAAAGC AAAAACCATG AACGATATCG GCTGGAAGGA AGCGCTGCTC ATAGGTCTTG CCCAGAGCAT CGCCCTTATT CCAGGCTCAT CACGTTCCGG AGTCACCATA ACCGGAGGCC TTTTTCTGAA CCTTTCGCGA GAAACCGCCG CAAGGTTCTC CTTTCTCCTC TCACTACCGG CGGTGTTTGC CGCAGGTATC TACCAGTTAT ATGAGACCCG GGATCAGCTC ATGGCATCAG GCAGCGACCT CCTGAACCTC GCTGTCGCGA CACTCTTTGC CGGTATCGTG GGATACGCCT CTATAGCCTT CCTGATCAAC TACCTCAAGC AGCACTCCAC CGCGCTCTTT ATCCTCTACC GCATAGCCCT CGGCGTCGGC ATTCTCGGAC TCATAGCCAA CGGTTATCTT CAGGCGTAA
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Protein sequence | MTLFEAIILG IVQGLTEFLP ISSTAHLRIV PALAGWQDPG AAFSAIVQIG TLAAVLIYFY KDIHSITRGV FDGLRSGRPF ETQESRMGWM IAAGTMPIVI LGLLFKTEIE TSLRSLYWIS VALIVLALML TLAEWLMKRR ADKGLKAKTM NDIGWKEALL IGLAQSIALI PGSSRSGVTI TGGLFLNLSR ETAARFSFLL SLPAVFAAGI YQLYETRDQL MASGSDLLNL AVATLFAGIV GYASIAFLIN YLKQHSTALF ILYRIALGVG ILGLIANGYL QA
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