Gene Cphamn1_1869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1869 
Symbol 
ID6375560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2026298 
End bp2027146 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content55% 
IMG OID642684365 
Productundecaprenyl pyrophosphate phosphatase 
Protein accessionYP_001960267 
Protein GI189500797 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0119311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTTT TTGAAGCAAT CATTCTCGGC ATCGTTCAAG GTCTCACAGA GTTTCTTCCC 
ATCAGCAGCA CGGCACACCT TCGCATAGTA CCGGCTCTCG CCGGGTGGCA GGACCCGGGA
GCAGCATTTT CTGCAATTGT GCAGATAGGC ACGCTTGCGG CTGTCCTGAT CTATTTCTAC
AAGGATATCC ACTCCATCAC CAGAGGAGTT TTCGACGGCC TCCGTTCAGG CAGGCCTTTT
GAAACACAGG AATCCCGAAT GGGCTGGATG ATTGCCGCCG GCACGATGCC GATCGTCATT
CTGGGCCTGC TCTTCAAGAC CGAGATAGAA ACCAGCCTGC GTTCACTCTA CTGGATCAGT
GTCGCGCTTA TTGTTCTGGC GCTCATGCTC ACCCTTGCCG AATGGCTGAT GAAACGGCGG
GCCGATAAAG GCCTGAAAGC AAAAACCATG AACGATATCG GCTGGAAGGA AGCGCTGCTC
ATAGGTCTTG CCCAGAGCAT CGCCCTTATT CCAGGCTCAT CACGTTCCGG AGTCACCATA
ACCGGAGGCC TTTTTCTGAA CCTTTCGCGA GAAACCGCCG CAAGGTTCTC CTTTCTCCTC
TCACTACCGG CGGTGTTTGC CGCAGGTATC TACCAGTTAT ATGAGACCCG GGATCAGCTC
ATGGCATCAG GCAGCGACCT CCTGAACCTC GCTGTCGCGA CACTCTTTGC CGGTATCGTG
GGATACGCCT CTATAGCCTT CCTGATCAAC TACCTCAAGC AGCACTCCAC CGCGCTCTTT
ATCCTCTACC GCATAGCCCT CGGCGTCGGC ATTCTCGGAC TCATAGCCAA CGGTTATCTT
CAGGCGTAA
 
Protein sequence
MTLFEAIILG IVQGLTEFLP ISSTAHLRIV PALAGWQDPG AAFSAIVQIG TLAAVLIYFY 
KDIHSITRGV FDGLRSGRPF ETQESRMGWM IAAGTMPIVI LGLLFKTEIE TSLRSLYWIS
VALIVLALML TLAEWLMKRR ADKGLKAKTM NDIGWKEALL IGLAQSIALI PGSSRSGVTI
TGGLFLNLSR ETAARFSFLL SLPAVFAAGI YQLYETRDQL MASGSDLLNL AVATLFAGIV
GYASIAFLIN YLKQHSTALF ILYRIALGVG ILGLIANGYL QA