| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1805 |
|---|
| Symbol | |
|---|
| ID | 6375492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 1952630 |
|---|
| End bp | 1954462 |
|---|
| Gene Length | 1833 bp |
|---|
| Protein Length | 610 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642684298 |
|---|
| Product | penicillin-binding protein 2 |
|---|
| Protein accession | YP_001960204 |
|---|
| Protein GI | 189500734 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
|---|
| TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAA TTCAGCATAG AGCTTTAACT GTATCACTGA TTGTCATAGC TGTCTTTGCT
GTCCTTTTTC TGCGACTCAT CTATCTTCAG GTATTCGAAT ACAAGGAACT TGGTTCGATT
TCGGCTGCAA ACAGTCTGCG GAGAATATGG ATACAGCCTC CCAGAGGCAG GATGATCGAT
CGTAACGGCA GTATTGTCGT CGACAACCAG CCGCTCTATA CAGTCAAAGT GATTCCTTCC
GAGTTCACGG ACTCTCTGAA AAAGAGTACC CTCGCATCCC TGCTTCATAT AACCGACGAA
AAACTTACGG AAAGGATCAA CAAGGGGTTC AAATACAACC GTTTTGCACC TGTTGCCGTT
GGTAGAGACA TCGAACCGAA AGAAATGATG CGTTTGAGTG AAAACCTCTG GAAGCTCCCC
GGAGTGATGA TCGATGTTGA AAACAAAAGA CAATATCCTT TAGACCTGCA CGCTTCACAC
CTTTTTGGAT ATCTCAATTT TATATCCAAA GACCAGCTTG AAGAGATGTC TGAAAAAGGC
TACACCCCTG ACGATAAAAC CGGAAGCAAG GGGCTTGAAA AAACCTATGA AGATCTGCTC
AGAGGAGAAA AAGGGGCGCG TTTCGAACTG GTTAATTCAA TCGGCAGGTT TGCCGGAAAA
TTTGAAAACG GCACGAGAGA CCGTCCTTTT GTCAATGGCA CTGACCTTCA TCTGACTCTT
GACGCAGGAT TGCAGCAGCT TGCGGAAGAG CTGTTGAAAA AAACGGAAAA ATCCGGGGCC
GTAGTGGCAA TTGACCCGAA CGACGGAGGG ATTCTCGCCA TGACCAGCCA GCCGGATTAC
GACCTGAACA TTCTGAACGG CACAACCGAT GGAAAAAAGT GGACTGAAAT AGTTCAGGAT
CCTGCAAAAC CGCTCTTTAA CAGAGCGATA CAGGCTTCCT ATCCTCCGGG ATCTGTCTAC
AAACTCCTTC TGGCCATAGC GGCGCTTGAG GAAAACGTGA TAACACCTGA AAAAAAGATC
TTCTGTACAG GAGTATTCAG ACTCGGACGC GGCCGTTTTC GTTGTCATGG CGGACAGGGG
CACGGCCCGG TCAATCTGGA ACGCTCCATA GTTGAATCAT GCAACACCTA CTACTATAGT
CTCATATTCG ATCTTGGTTT TGAACAATGG ACACGATACG GAAGAATGTT CGGATTTGGA
AAAACAACAG GCATCGACCT TTCGGGTGAG CGTTCTTCAC CGCTTCCCTC GACTGAATAT
TATGATAAAC GGTATGGAAA AGGCAAATGG ACAAAGGGCT ATCTTGTCAG CCTTGCTATC
GGACAGGGAG AGTTGAACAC AACGCCCCTA CAACTTGCCG CCTTTACGGC AACAATAGCC
AACAAAGGCA CCTGGCATCA GCCGCACGTT GTCAAAGGCT ACCAGTCATA CGACAGCGAC
ACGTTTGTAC CTCTTGATTT CAAAAAAAAC AAGCTGCCGA TCTCCGAGAA AACCTTTGAA
AGAGTTCGCC AGGCGATGTT CGGAGTCGTT GAACGGGGAA CCGGAAGGCT CGCAGGGGTG
GAAAATGTCA AAGTCGCAGG CAAAACCGGA ACCGCCCAGA ACCCTCACGG CAAGGATCAT
GCCTGGTTTG TCGCTTTCGC CCCGCTTGAA AAACCAACGA TAGCAGTCGC TGTTCTTGTT
GAGAACGCAG GTTACGGGGG TAGTATTTCA GCTCCTATAG CTGGAAAGCT GATTAATTAT
TATGTTAACG GTCCTGACAC CACGGCAACC GACACGCTCT CTGTCAGTAC GGCAGTGACT
GACAGCAGCA AAACAGAACC CGCGACTGAA TGA
|
|---|
| Protein sequence | MDKIQHRALT VSLIVIAVFA VLFLRLIYLQ VFEYKELGSI SAANSLRRIW IQPPRGRMID
RNGSIVVDNQ PLYTVKVIPS EFTDSLKKST LASLLHITDE KLTERINKGF KYNRFAPVAV
GRDIEPKEMM RLSENLWKLP GVMIDVENKR QYPLDLHASH LFGYLNFISK DQLEEMSEKG
YTPDDKTGSK GLEKTYEDLL RGEKGARFEL VNSIGRFAGK FENGTRDRPF VNGTDLHLTL
DAGLQQLAEE LLKKTEKSGA VVAIDPNDGG ILAMTSQPDY DLNILNGTTD GKKWTEIVQD
PAKPLFNRAI QASYPPGSVY KLLLAIAALE ENVITPEKKI FCTGVFRLGR GRFRCHGGQG
HGPVNLERSI VESCNTYYYS LIFDLGFEQW TRYGRMFGFG KTTGIDLSGE RSSPLPSTEY
YDKRYGKGKW TKGYLVSLAI GQGELNTTPL QLAAFTATIA NKGTWHQPHV VKGYQSYDSD
TFVPLDFKKN KLPISEKTFE RVRQAMFGVV ERGTGRLAGV ENVKVAGKTG TAQNPHGKDH
AWFVAFAPLE KPTIAVAVLV ENAGYGGSIS APIAGKLINY YVNGPDTTAT DTLSVSTAVT
DSSKTEPATE
|
|---|
| |