Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1786 |
Symbol | |
ID | 6375473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1930875 |
End bp | 1932617 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642684279 |
Product | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD |
Protein accession | YP_001960185 |
Protein GI | 189500715 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.540323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCTG ACCGGCGATT ACTTCAGCTT CTCAGGCAGT ACCCGCTTCC CTTTGTCACG TCGGTTCTTC TCGCAACTCT CGGAGGCATC ATGCTGATAG GTCAGACCTT TCTCTTGAGC AGCATAATTG ATGCTCTCTT TCTGAAACGT GCGGCTCTCG ACAATATTCT CAATCTCCTT CTGCTCTATG GACTGGCAAG TATGCTGCGG GCAGGATTCA ACTGGACAAG CCGCAACGAG GCTAATCGGG GAACACTGAA AATAAAACAG CAGCTGCATC GTCAGGTACT CAAAAAAATC TCTTCTCTCG GACCGGTCTA TGCCGGTTCA CAACGGAGCG GCAAGCTCAG TTCGACAATT CTTAAGGGGA TTGAATCACT CGACCCCTAT TTCAGCCAGT TCATGCCGCA ACTCGCTCTC TCTATCCTGC TGCCTTTGAC TGTTCTCTTC GCTGTGTTCC CTGTAGACAT GCGCAGCGGC TTTATTCTGC TTGGAACGGC GCCGCTCATA CCGCTATTCA TGGTACTGAT AGGAAAAGCC GCTCAAAAAG CGACGCAAAA ACAGTGGGAG ACGCTCAGCA GAATGAGCGG TAATTTTCTC GACGTTCTTC AGGGAATGAC GACACTCAAG CTTTTCGGGA GAAGCCGGGA AAGGATCCGC TCGATATCGG AAATAAGTGA GGCGTATCGA CACGCGACCA TGAAGGTACT CAAGGTTGCC TTTCTTTCGT CGCTCACCCT GGAACTTGTA GGCGCCGTTG GCACCGCGAT CATCGCTGTG GATATCGGAC TGCGAATCTG GTCGGGCACG ATAGCCTTCC TCCCCGCATT CTTTGTTCTT CTGCTTATAC CTGACTTCTA CCTTCCTCTT CGTCAGCTCG GCACAAAATT CCATGCCGGC ATGGAAGGAG TCAGCGCAGC AGACGATATC TACACGCTGC TTGACAAGCC GGAACCGGAT ACCGTGGAGC CCCCTGCACC ACAGGAATGC GGCAGGTATT CAACAACGCC CATTGTGTTT AACGCTGTCG GGTTCACCTA TACTGATGAC GATTCCTACG CGCTGAAAAA TGTATGTTGC GAACTGAAAC CCGGAACGAT AACAGCAATA ACAGGACCGA GCGGTGCGGG TAAAACAACC TTCATCAACC TGTTGCTCCG CTTCCTCGAA CCCCGTGAAG GCTCAATACT GTTCGGCAAC ACGAACCTGA AGAACATCAA CCGTGAAACA TGGCTTCAGG GAGTTTCATG GGTACCGCAA CACCCCTATC TGTTTAACGC GACCCTCAGG GAAAACCTCC TTATAGCGAA ACAGGACGCT ACGGAAGATC AACTGAAACA CGCCATATCT GAAAGCCGCC TCGAACCCTT TATCAATTCC CTGCCGCAAG GTCTCGATAC ACCTGTCGGT GAGCAGGGGG CAAGAATAAG CGGAGGTGAA GCCCAACGTC TTTCTCTTGC CAGAGCGTTT CTTCATGACT CGCCGCTGCT TGTTCTCGAT GAACCGACAT CACACACGGA TCCTGCTCTC GAACAGGAAC TCCTTGCATC AATGCAGCGA CTGATCAGAG GAAAAACAGC CGTCCTTATC GCTCACCGCC TGAGTACAGT CAGAAATGCA GATCAGATTC TGGTGTTCGA CAGCGGCACG ATCGTACAGT CCGGCACACA CCTCTCGCTT ATGCAAGAGA GTGGTTTTTA CCGCGACGCC ATGCATTCCG ACGAGGAGGT TGCCGTACAA TGA
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Protein sequence | MNPDRRLLQL LRQYPLPFVT SVLLATLGGI MLIGQTFLLS SIIDALFLKR AALDNILNLL LLYGLASMLR AGFNWTSRNE ANRGTLKIKQ QLHRQVLKKI SSLGPVYAGS QRSGKLSSTI LKGIESLDPY FSQFMPQLAL SILLPLTVLF AVFPVDMRSG FILLGTAPLI PLFMVLIGKA AQKATQKQWE TLSRMSGNFL DVLQGMTTLK LFGRSRERIR SISEISEAYR HATMKVLKVA FLSSLTLELV GAVGTAIIAV DIGLRIWSGT IAFLPAFFVL LLIPDFYLPL RQLGTKFHAG MEGVSAADDI YTLLDKPEPD TVEPPAPQEC GRYSTTPIVF NAVGFTYTDD DSYALKNVCC ELKPGTITAI TGPSGAGKTT FINLLLRFLE PREGSILFGN TNLKNINRET WLQGVSWVPQ HPYLFNATLR ENLLIAKQDA TEDQLKHAIS ESRLEPFINS LPQGLDTPVG EQGARISGGE AQRLSLARAF LHDSPLLVLD EPTSHTDPAL EQELLASMQR LIRGKTAVLI AHRLSTVRNA DQILVFDSGT IVQSGTHLSL MQESGFYRDA MHSDEEVAVQ
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