| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1773 |
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| Symbol | |
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| ID | 6375460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 1920149 |
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| End bp | 1921549 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642684266 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001960172 |
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| Protein GI | 189500702 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCC TTGACTTTTT TGATGAAGGC GGCAACAGCG ATACGAACGG CAACTACAGG
AATCTTCAAC TTGACGACTT AGATCTCACA TCCATATATG ACACCGAAGA GCTGATAGAG
ATAATCATCC AGTTCAACGA AGAGGGGAAA CATCCGGAAG CGCTGGCTGT GGCCCGGCAT
TTAACCGAAA CAGCATCCTA CAATGCGGAA TCCTGGTTTC ACCTGGGAAA CTGTCTGACA
GTCAACGGTT CATTTGACGA CGCGAAAGCT GCCTTCAGTA AAGCGACTGT TCTCAGTCCC
GCTGACAGTG AGATGAGACT GAATCTCGCA CTCGCGCATT TCAATACCGC CGAATACAAG
ACCGCTCTCG ATAAACTCGA CTCCATCCTG TGCGATTCGA CTCTTGAAAA GGAGATGTAT
TTCTATAGAG GACTTATTCT TCAGAAAATG GAGCGTTACC GGGAGTCCGA AAAATATCTT
GAAAAATGCC TCGCCCTGGA ACCGGACTTC GCGGAAGCGT GGTATGAGCT CGCGTTCTGC
AAGGATGTCC TTGGAAAAAT GGAGGAGAGC GCGACCTGTT ATCAAAAAAC CATTGATCAG
GACCCCTACA ATGTCAATGC CTGGTACAAT AAAGGGCTTG TGCTGAGTAA ACTGAAAAAA
TATGACGATG CCCTTGAATG TTACGATATG GCTATTGCAA TAGCCGATGA TTTCAGCTCG
GCCTGGTATA ACAGGGCAAA CGTTCTGGCT ATTACAGGAA AAATTGAAGA AGCCGCTGAA
AGTTACCTCA AAACGATTGA ATTTGAACCT GACGACATCA ATGCGCTTTA CAATCTTGGC
ATAGCTTTTG AAGAGCTTGA AGACTACGAC AAAGCGATAA CGCACTATAC GAGGTGCATC
GAGCTGAAAC CGGATTTCGC GGATGCATGG TTTGCACTTG CCTGCTGTCA TGAGGCTGAC
AATGCCTATG AGGAGGCATT GAAATCGGTA AATCAGGCGC TGAACTATCT TCCGGGTTCG
GTTGATTTTC TTCAGTTGAA AGCCGAGATT TACTATAACA TGGAAAGTCT CGAACGATCG
ATCAGCACCT ATAAAAAAAT CCTTACGATC GAGGCTGACT CTCCCCAGCT TTGGGTTGAT
TACGCTGTCG TGCTGCGGGA GGCTTCCCTC TATACAGAAT CTCTGGAAGC CTTTGAACAT
TCTCTTGAGC TCCAGCCACA ATCAGCAGAG ACCCATTTTG AGATCGCAGC GACCTATTTT
GCCCTTGGCG ATAAAAAAAG CACGATCAAA TCATTGACAA AGGCTTTCTC CATCGATCCT
GACAAGAAAC AGCTTTTCAA GACAACCTTC CCTGAGCTCT ATAATCAGGA TTCGGTTCGG
GAAATACTGG GTATTGTCTG A
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| Protein sequence | MSFLDFFDEG GNSDTNGNYR NLQLDDLDLT SIYDTEELIE IIIQFNEEGK HPEALAVARH
LTETASYNAE SWFHLGNCLT VNGSFDDAKA AFSKATVLSP ADSEMRLNLA LAHFNTAEYK
TALDKLDSIL CDSTLEKEMY FYRGLILQKM ERYRESEKYL EKCLALEPDF AEAWYELAFC
KDVLGKMEES ATCYQKTIDQ DPYNVNAWYN KGLVLSKLKK YDDALECYDM AIAIADDFSS
AWYNRANVLA ITGKIEEAAE SYLKTIEFEP DDINALYNLG IAFEELEDYD KAITHYTRCI
ELKPDFADAW FALACCHEAD NAYEEALKSV NQALNYLPGS VDFLQLKAEI YYNMESLERS
ISTYKKILTI EADSPQLWVD YAVVLREASL YTESLEAFEH SLELQPQSAE THFEIAATYF
ALGDKKSTIK SLTKAFSIDP DKKQLFKTTF PELYNQDSVR EILGIV
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