Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1764 |
Symbol | |
ID | 6375451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1908177 |
End bp | 1910480 |
Gene Length | 2304 bp |
Protein Length | 767 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642684257 |
Product | (NiFe) hydrogenase maturation protein HypF |
Protein accession | YP_001960163 |
Protein GI | 189500693 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0068] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAGAA TGGCTGCAGT CAAGACTGAA AAAAGAGTAA GATGTTTTGT GTCCGGCATT GTACAGGGTG TCGGGTTCAG ACCTTTCATT TACCGCCTTG CCAAAGGGGC CGGTTTGAGC GGTTATATCC GTAATACATC TTCAGGTGTG TGCATTGAGA TACAGAGTCC TGAATCATCG AAGCTTGACA GGTTTTTTTT CGATCTGCGA CATATGGCCC CCCCGCTCGC GAAGATAACA TCGATTGAAA TTGAAGAGAT CCCCCCTTCT TCTGAGAGGG AATTCGTGAT TATGTCATCG GATGATGAGG GGGCGGCAGA GACGCTTGTC GCCCCTGATA TTGCCATGTG TGAAGCCTGC CGGAAGGAGC TGTTGAGCCC TTCAGACCGA AGACACGGCT ATGCATTTCT TAACTGCACC GACTGTGGCC CACGGTATAC CATTATAGAA CGGATCCCCT ACGACAGGCG GTATACGTCG ATGAAAGATT TTACGATGTG TCCCGACTGT GAGCGTGAGT ATCACGATCC CATGGACAGG CGATTTCACG CGCAGCCAAA TGCCTGTCCT GTCTGCGGAC CCTCTTTACA GATACTTGAC AGGGACGGCA ACGTAGTACC GTGCGATGAT CCTGTAGGTT ATGCTGTGGC TTCGCTGAAA AGTTCGGGAG TTGTGGCGGT TAAGGGGATC GGTGGTTTTC ATCTTTCGGT AGATGCCTTT GATGATAAGG CAGTTTCTGC TCTGAGAAAG AGAAAAAGAA GAGAGGAAAA ACCGTTTGCC GTGATGGCAA GATCGATTGA AACGATTGAA AAGTTCTGTG ATATCAATGC GTCTGAGCGT GAGGCACTCT GTTCGCCTCA GGCTCCTGTC GTTCTCTTGA AGAAAAAAGC ACGTCACGGC CTTTCGGAGG AGATAGCTCC TCGAAACGAT CGACTGGGGG TTATGCTTCC CTACGCTCCC CTGCATGTGC TTTTGATGAA CCGGGGTCCT GAAATGCTGG TCATGACAAG CGCAAACAGT TCCGATGAGC CCATAGCGAT CGAAAACAGT GAGGCGGTGT CCCGCCTGCA GGAGATCGCC GACTGCTATC TTGTGCATGA TCGTCCGGTC TATCTGCGAT GCGATGATTC CGTTACGGTT CATCTTGCCG GGAAACTGCG GCAGGTCAGG AGGAGCAGGG GGTATGTGCC GGAGCCTGTC CCGCTGCTTT CAGGGGGCGC TTCGGTATTT TCCACCGGAG CTGAAATCAA GAATACGGTA TGCCTGCTCA AAGGAAACAG TGCGATAGTG AGCCAGCATA TCGGAGATCT CAGGAACTAT GAGTCCTATC GCCATTTTCA GATGGTTGCG GATCATCTGC AGCAAATTTT TCAGGCATCG CCTGAACTGA TCGTCTCTGA TATGCATCCG GCATATCTGT CTTCCCTGTG GGCGCTGGAG CAGAAAGATA TTCCCTCGCT TGCCGTGCAG CACCATCATG CCCATCTGGC ATCCTGTCTT GCGGAAAATC TGAGCGACGC CCCGGCCATA GGGGTCATTC TCGATGGTAC CGGCTACGGG ATCGACGGAA CAAGTTGGGG AGGAGAGGTT CTGATCGGTG ATGCGGCGGA GGCATACCGT TTCGCATGCT TCGACCCTGT TCCGCTGCCC GGTGGTGATG CCGCTGTTTT TCACCCATGG AGAGCCGCAG CCGGTTATCT TTTCCATAGT TTCGATACGG TTCCTGAACC TGGTTTCATG AGGGACAAAG ATATGTCGGG CGTCATGCAG TTACTGGAAA AAGGTGTCAA TTCCCCTGTT ACCAGCAGTT GCGGAAGGCT TTTTGACGCG GTAGCGGCGT TAACCGGTCT TTGCAGTGAT ATCAGTTATG AGGGACAGGC TGCAATCGAG CTTATGTTAG CAGCGAGAGG TTTTGAGGGG GAGCCTTTTT CATGGGAGAT TTCAGCATCA GGCGATGACA GATGGCGGCT GGACATATCG CCAATGATTC GCGACATTGT CACGGCTGTA CAATCAGGCG TTCCCGTTGC AGTAATCAGT AGTCGTTTTC ATGTAACAAT TGTTGAGTTA TTGTATGCTA TTGTTAGAAA AGCGGTTGCC TATTCAGGAA TTCACCGTGT TGTTCTCAGT GGCGGGGTCT TTCAGAACGC TTTGCTGTTT GAGCGATTGA CGGAAAAACT GGAACGTCAC GGTCTGACGG TGCTGACGCA CGCTCTCGTC CCCTGCAATG ACGGAGGCAT TTCTCTCGGT CAGGCGGTTA TCGGCAGGGA ATACCTGAAG GGCCGGTATA AGGGAGTTTT GTAA
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Protein sequence | MDRMAAVKTE KRVRCFVSGI VQGVGFRPFI YRLAKGAGLS GYIRNTSSGV CIEIQSPESS KLDRFFFDLR HMAPPLAKIT SIEIEEIPPS SEREFVIMSS DDEGAAETLV APDIAMCEAC RKELLSPSDR RHGYAFLNCT DCGPRYTIIE RIPYDRRYTS MKDFTMCPDC EREYHDPMDR RFHAQPNACP VCGPSLQILD RDGNVVPCDD PVGYAVASLK SSGVVAVKGI GGFHLSVDAF DDKAVSALRK RKRREEKPFA VMARSIETIE KFCDINASER EALCSPQAPV VLLKKKARHG LSEEIAPRND RLGVMLPYAP LHVLLMNRGP EMLVMTSANS SDEPIAIENS EAVSRLQEIA DCYLVHDRPV YLRCDDSVTV HLAGKLRQVR RSRGYVPEPV PLLSGGASVF STGAEIKNTV CLLKGNSAIV SQHIGDLRNY ESYRHFQMVA DHLQQIFQAS PELIVSDMHP AYLSSLWALE QKDIPSLAVQ HHHAHLASCL AENLSDAPAI GVILDGTGYG IDGTSWGGEV LIGDAAEAYR FACFDPVPLP GGDAAVFHPW RAAAGYLFHS FDTVPEPGFM RDKDMSGVMQ LLEKGVNSPV TSSCGRLFDA VAALTGLCSD ISYEGQAAIE LMLAARGFEG EPFSWEISAS GDDRWRLDIS PMIRDIVTAV QSGVPVAVIS SRFHVTIVEL LYAIVRKAVA YSGIHRVVLS GGVFQNALLF ERLTEKLERH GLTVLTHALV PCNDGGISLG QAVIGREYLK GRYKGVL
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