Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1622 |
Symbol | |
ID | 6375302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1749217 |
End bp | 1750218 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642684111 |
Product | Outer membrane protein (porin)-like protein |
Protein accession | YP_001960023 |
Protein GI | 189500553 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000161608 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAAA AAATCCTGTC ACTATTGTGC CTGGTCATGG TCTGGGCACT ACCGTCTGCA CTGCAGGCGG AAATGAAACC GAGTGTTACC GTTTACGGTA ATCTTCGTTA TTCTTTCAAC TACGTTGATG ATGAATGGAG CGGTATCGAG CGCTGGAAGG GAACTGACAA TGTCTCCCGT TTCGGTATCA AGGGTTCCTA CGGCAATGAA AAAGGAAAAG CTTTTGTTCA CCTGCAGGTC GGTGCCCCTT CCGATGAGAA TAAAGACGGT CATGGTTTTA CACAGCGCTT CTTCTTTGGT GGCTTCGAAT GTGATTACGG TAAATTGACT TACGGCCGTA TGACCAACGC CTACAAATTC CCCGGTTATG CGCTTGATCC TTTCTACGAT CTTTCAAGAA TCAATTCTGG TGGCGTTTTT GCAGGCGGCG GAGCATCCTA CGGTCTGTCA CCCGCTACAA ACAGATTTAC CGACAACTCC TTGCAGTACG TCACGCCGGA TCTGAGCGGT TTCAAGCTTC TTGGAGGCAT CGCGTTTGAT GAAAGCAACG ACGATAATGA ACTGGCTTAT CTCGCAGGCG GTTCATACAC GACAGGCGGA TTAACCTTGG GTGGGGTGTA TGCTGACAAC CCTGAAACGA AAGTGGTTTA TTACGGTATC GGTGCCGATG GCGAAGCTAT CCGTGCCTAT GCCACGTACA AAACTGATGG CTGGAAGGTA GGCGCTTCCT ATGAAAACGT CAGTAACGGC ATGGACGTCA GCTACTACTA TCTGACAGGA ACCGCCATGC TTAAAGAGGC AAAAACCGAT CTTTCCCTTT CTCTGGGTAT GGTTGATGAC GGAGCGTCTG AAGGAATGGG CATCACCGGT GGTGTTTTCC ATCACCTTCT TGACAATGCC CAGGTTTATG CAATGGCAAG TTACGCTGAT CTCGAGTCAG ATTATGCTCC TTATGTTCTC TCTGTAGGTG CCATCTACAA CTTCAGTTAT ACTGCTAATT AA
|
Protein sequence | MKKKILSLLC LVMVWALPSA LQAEMKPSVT VYGNLRYSFN YVDDEWSGIE RWKGTDNVSR FGIKGSYGNE KGKAFVHLQV GAPSDENKDG HGFTQRFFFG GFECDYGKLT YGRMTNAYKF PGYALDPFYD LSRINSGGVF AGGGASYGLS PATNRFTDNS LQYVTPDLSG FKLLGGIAFD ESNDDNELAY LAGGSYTTGG LTLGGVYADN PETKVVYYGI GADGEAIRAY ATYKTDGWKV GASYENVSNG MDVSYYYLTG TAMLKEAKTD LSLSLGMVDD GASEGMGITG GVFHHLLDNA QVYAMASYAD LESDYAPYVL SVGAIYNFSY TAN
|
| |