Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1616 |
Symbol | |
ID | 6375296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1741443 |
End bp | 1744133 |
Gene Length | 2691 bp |
Protein Length | 896 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642684105 |
Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
Protein accession | YP_001960017 |
Protein GI | 189500547 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0474] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01517] plasma-membrane calcium-translocating P-type ATPase [TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACAGG AACAACCGTG GCACAGCAGA CCAGCCGAGG ATACCTTCTC TTTGTTATCC ACTTCCGGCA AGGGCCTTAA AACGAGCGAA GCTGCGGCAC GCGCTGCACG CTACGGACCA AACCGTCTCA CGCCCGCAAA AAAACAGAAC CCCCTGAAGA GGTTCCTGCT GCAGTTCAAA AATATCCTTA TCTACGTCCT GCTTGCAGCA ACCCTCGTCA CCGCTTTGCT GGATCACTGG ATCGATGCCT GGGTGATTCT CGGAGTGGTA TTCATCAACG CGTTAATCGG ATTCATCCAG GAAGGAAAAG CCGAAAAGGC TCTTGACGCA ATTAAAAACC TCCTCTCCCC CCAGGCGATG GTCCGACGGG ACAACCGAAC GTTCAATGTA CCGTCCGATC AACTGGTACC GGGAGATGTC GTCATCCTGC AGTCGGGCGA CAAGGTTCCA GCGGACATAC GTCTGTTTTC CGTCAGGAAC CTCCTCATCG ATGAATCCCT GCTGACAGGA GAATCTCTTC CGGTAGAAAA ATGCAACGAA ACGATAAGGG TCGATACGCC GCTGGCTGAA CGTGCGAACA TGGCATTTTC AGGCACACTT GTCACGTACG GAAAGGGAGA AGGTGTTGTA ACCGGAACAG GGGACCGGAC GGAAATTGGG CTCATCAGCT CAATGCTCAG CAAAGTAGAA ACCCTGGAGA CCCCGCTGCT TCGACGCGTC AACGAATTCT CCCGAACCCT GACCATTGCA ATTGTACTGC TTTCAGCAGT GCTTTTTGGC TTTGGCGTTC TCGTCAGAGG ATACTCGTTA ACTGAAATGT TCAATGCTGC GGTCGGTCTT GCCGTCGCCG CCATTCCGGA AGGTCTGCCC GCAATCATGA CTATCGCGCT GGCGATCGGT GTACAGGCAA TGGCACGCAG AAAGGCCATT ATCCGTCGGC TGCCGGCAGT AGAAACCCTT GGCTCAGTAT CGGTCATCTG TTCAGACAAA ACCGGAACAC TGACCCGCAA CGAGATGACC GTGAGAAACG TTGCTCTTCC GGCCAAACGT TTTGAAGTCA CCGGTTCGGG TTATGACCCC CACGGCGCAT TCCTGCTTGA CGAAAAAGAG ATTGATCTGC AGAACTATTC CCAGATGAGA GCTCTTGCGC ATATCGCTCT GCTCTGCAAC GATGCGACTC TTGATTTTCG CGATGAGCAA TGGGTACTCT CCGGAGACCC GACAGAAGGA GCCCTCTCTG TCCTCGGCAA AAAAGCAGGC TATGACCCTG ACACGGAACA GCAAAACTGG CCAAGAATCG ATCTGATTCC ATTCGAGTCC GAATACCGTT TCATGGCAAC CCTGCATCAC GATCATACAG ACAGAGCTTT CATCTACCTG AAAGGAGCCC CTGAAATTGT ACTCGAACGT TGTACGAAAC AGAGACATGG AGAAACCGAT GAGTCTCTCG ATTCGTCTTA CTGGGAAAAA ACCATAACAA AGATGGCTGC CGAAGGCCAG AGGTTACTTG CCATAGCATG TAAAAAGACA ACAAGCGACC AGAGCACTCT TAACTTTGAA GATGTTGCAT CCGGGCTGAC GCTGATCGGA ATAGTCGGTA TGATGGACCC GCCGAGAGAT GAAGCGGTCT CGGCTGTCAA ACGCTGCCAA CAGGCAGGCA TACGAGTCAA GATGATCACT GGTGATCATG CCGATACCGC CTTGGCTATC GGCAAAATGA CCGGCATCGG TGATGGCTTG AACGCCCTGA CAGGAACAGA AATTGAAGTG ATGAGCGATG AGGAACTGCG ACAAAACGTC AACAGGATCG ATATCTTCGC CCGCAGCAGT CCTGAACATA AAATAAGGCT GGTCAAGGCG CTCCAGTCCA ACGGCTCTGT TGTCGCCATG ACCGGGGACG GTGTCAATGA CGCCCCGGCA CTGAAAAGGG CCGATGTCGG AATAGCAATG GGGCAGAAAG GCACGGAGGT ATCCAGGGAA GCAGCTGAAA TGATTCTCGC CGACGACAAT TTCGCAACCA TAGCAAACGC CGTCGAGCAA GGAAGAACAG TCTATGACAA CCTGAAAAAA TCCATCATGT TCGTCCTGCC GACAAACGGG GGCGAGGCGC TCAGCATCCT CTTCGCCATA GCACTGGGCT ATACGCTACC GGTTACGGCC ATTCAGATCC TCTGGGTTAA CATGGTTACA GCAGTAACGC TCGCACTCAC CCTTGCGTTC GAAAAAGCGG AACACAATGT CATGGAACGG AAACCAAGGA AATCCGGCGA GCCGATCCTT TCGGGTTTCA TTGTCTGGAG AATCGCCTAT GTTTCGCTTA TCCTGCTGAG CGGCACTTTT GGGCTGTTTC TCTGGTATGA AAACGCAGGG TATTCACATG ACATGGCACG AACCGTCGCC GTCAACACTC TGGTCTTGTT TGAAATCTTC TACCTCTTCA GTTCGCGTTT CTTTGTTGCC TCTGTCTTTT CAAAAGAGGG GTTCGTGGGC AACCCTGCCG TACTCTATGC AGTCGCCATA CTCATCGTAC TGCAGTCGCT GTTCAACTAT GCCCCGTTCA TGCAAAGTCT GTTTGCGACG GTGCCGCTTG GCCTCCAGGA CTGGGCCGTT ATTCTGCTGG TCAGTTCTTC GGTGCTCTTT CTTGTCGAAC TCGAAAAATA TATACTCAGA AAACGTCGTC CCTCTACGTA G
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Protein sequence | MIQEQPWHSR PAEDTFSLLS TSGKGLKTSE AAARAARYGP NRLTPAKKQN PLKRFLLQFK NILIYVLLAA TLVTALLDHW IDAWVILGVV FINALIGFIQ EGKAEKALDA IKNLLSPQAM VRRDNRTFNV PSDQLVPGDV VILQSGDKVP ADIRLFSVRN LLIDESLLTG ESLPVEKCNE TIRVDTPLAE RANMAFSGTL VTYGKGEGVV TGTGDRTEIG LISSMLSKVE TLETPLLRRV NEFSRTLTIA IVLLSAVLFG FGVLVRGYSL TEMFNAAVGL AVAAIPEGLP AIMTIALAIG VQAMARRKAI IRRLPAVETL GSVSVICSDK TGTLTRNEMT VRNVALPAKR FEVTGSGYDP HGAFLLDEKE IDLQNYSQMR ALAHIALLCN DATLDFRDEQ WVLSGDPTEG ALSVLGKKAG YDPDTEQQNW PRIDLIPFES EYRFMATLHH DHTDRAFIYL KGAPEIVLER CTKQRHGETD ESLDSSYWEK TITKMAAEGQ RLLAIACKKT TSDQSTLNFE DVASGLTLIG IVGMMDPPRD EAVSAVKRCQ QAGIRVKMIT GDHADTALAI GKMTGIGDGL NALTGTEIEV MSDEELRQNV NRIDIFARSS PEHKIRLVKA LQSNGSVVAM TGDGVNDAPA LKRADVGIAM GQKGTEVSRE AAEMILADDN FATIANAVEQ GRTVYDNLKK SIMFVLPTNG GEALSILFAI ALGYTLPVTA IQILWVNMVT AVTLALTLAF EKAEHNVMER KPRKSGEPIL SGFIVWRIAY VSLILLSGTF GLFLWYENAG YSHDMARTVA VNTLVLFEIF YLFSSRFFVA SVFSKEGFVG NPAVLYAVAI LIVLQSLFNY APFMQSLFAT VPLGLQDWAV ILLVSSSVLF LVELEKYILR KRRPST
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