| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1609 |
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| Symbol | |
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| ID | 6375287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1734095 |
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| End bp | 1734679 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642684097 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001960011 |
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| Protein GI | 189500541 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.994867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGAAG AGGCGGTGAA ACGTGACCCG TGTGACGTCG AAAAGCAGTA TGAGCTTGCG
CTTGCCTACA TGGATAACGA GCGTTACAGT CAGGCCACAG GAGTATTTGA CTCTCTTATC
AAGAGTGACG GGAAGCATGT CAACGCGCTG TATTCAAGAG GAGTGGCCCA TATGGCAACA
GGCAACTACC GGCAGGCAGG ACAAGACTTT CTTCGCGCTC TTGCTGTTGA CCGGGGGTTT
CTTTCAGCAT ACAAGAATCT CGGGTTTGTC CAGCTCACGA TGGGAAAAGA GGAACTTGCT
CTTACTACGC TTGAAAAGGT GCTTGAGATC GACCCGGAAT ATGTTGATGC CTACTGTCTT
CTCGGAGATG TGTATATCGA CATCGGAAAA TACGACAAGG CAAGGGAGAT GATAGAGAAG
GCTCTGGAGC TGGATCCGGA TGGTGCCGAG CCGCATTGTA AAATGGCCAT GTATTGCCTC
TCTCAAGGTG ATTTCAAGGG ACTCAGGGAG GAATACAGAA TATTGAAAGA GCTTGATCCG
GCGCTTGCGT CGCAGATTGG AGGACTGTTT TTTGATGAAG CCTGA
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| Protein sequence | MLEEAVKRDP CDVEKQYELA LAYMDNERYS QATGVFDSLI KSDGKHVNAL YSRGVAHMAT
GNYRQAGQDF LRALAVDRGF LSAYKNLGFV QLTMGKEELA LTTLEKVLEI DPEYVDAYCL
LGDVYIDIGK YDKAREMIEK ALELDPDGAE PHCKMAMYCL SQGDFKGLRE EYRILKELDP
ALASQIGGLF FDEA
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