Gene Cphamn1_1586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1586 
Symbol 
ID6375264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1710273 
End bp1711679 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content47% 
IMG OID642684074 
Productcytochrome c oxidase subunit I 
Protein accessionYP_001959988 
Protein GI189500518 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3278] Cbb3-type cytochrome oxidase, subunit 1 
TIGRFAM ID[TIGR00780] cytochrome c oxidase, cbb3-type, subunit I 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAA GCCCTTACGA ATATCAGGTT GTTCGCGGCT TCACTTTTTC TGCCCTGTTC 
TGGCTGATAG TCGGCTTGAT CGTCGGGCTA TGGATTGCTT TTGAAATGTT CTATCCGGCG
CTGAACCTTA CTCCGTGGCT GAGTTTTGGC CGTCTGCGGG TTGTTCATAC CAATGGCCTG
GGGTTGGGAT TTGGATTGGC TGGAATTTTC GCCTGTTCTT ATTACATTCT TCAAAAGCTG
ACACGAACCC CCCTTGTTTT TCCCCGTCTT GCCAGGGCTC ATCTCTATCT TTTCAATGCT
ATCATTGTCA TGGCCGCGCT GACGCTTATG GCTGGAATGA ATACCACGAA AGAGTATGCA
GAACTTGAGT GGCCTCTGGA CATCGCCGTG GTTGTTATGT GGGTTATGTT TGCAGTAAAC
GTATTTGCGA CTCTTATCAA GCGCCGGGAA AAGCAGCTGT ATGTTTCGCT CTGGTATATC
ATAGCTATGA CTGTCACCAT AGCTGTTTTA TACATCGTCA ATAACCTTGA GGTGCCCGTC
AATCTATTCA AGTCCTACTC TCTCTATGCC GGTGTAAACG ACGCGAATGT GGAATGGTGG
TACGGACACA ATATTGTCGG CTTCATTTTT ACCATTCCTA TATTGGCGAT GTTTTACTAC
TTTCTTCCGG TCTCCACCGG ACTTCCCCTT TTCAGTCACC GGTTATCGAT TATTTCATTC
TGGTCGTTAA TCTTTGCCTA TCTCTGGACA GGCGCGCATC ATCTTATGCT TTCTCCTGTG
CCTGAATGGA TACAGACGGT CGCTATCGCG TTCAGTATTT TTCTGATAGC CCCTTCCTGG
GGCTCGGTGG TCAATGGCTA CTACACGCTT CAGGGAAACT GGGAGCAGAT TCGCTCAAAT
TATCTGGTTA AATTTTTTAT TCTCGGGATT ACCTTCTACG GATTGCAGAC CTTTCAGGGG
CCGACACAGG GCTTAAGAAC GCTGAACTCA TTTTTCCATT TTACTGACTG GGTTGTCGGT
CATGTGCATA TGGGGACGAT GGGCTGGGTG ACCTTGACCA TTTCAGCCTC ATTTTACTAC
ATGATTCCTA AAATCAGCAA CAATCAGTTA CATAGCATCA GGATCGCCAA TGTTCATTTC
TGGCTGATTC TTGTCGGACA GCTTATCTGG ACGGTTACTA TGTGGATTGG CGGTATTCAG
CAGGGGGCCA TGTGGAAGGC CACTGAGCCG GACGGTTCAT TGACCTATAA TTTCCTTGAC
GCTCTCGCGT CGCTTTATCC CTACTATAAA CTGAGGTTCG CGGGAGGAGT CGTCTACTTC
GTGGGGATCG TTCTTTTTGT CTGGAACATT ATCATGACAA TAAGAACTGC AAAAAATCAA
CCTCTGAACG CAAACAAGGA GGTATGA
 
Protein sequence
MKESPYEYQV VRGFTFSALF WLIVGLIVGL WIAFEMFYPA LNLTPWLSFG RLRVVHTNGL 
GLGFGLAGIF ACSYYILQKL TRTPLVFPRL ARAHLYLFNA IIVMAALTLM AGMNTTKEYA
ELEWPLDIAV VVMWVMFAVN VFATLIKRRE KQLYVSLWYI IAMTVTIAVL YIVNNLEVPV
NLFKSYSLYA GVNDANVEWW YGHNIVGFIF TIPILAMFYY FLPVSTGLPL FSHRLSIISF
WSLIFAYLWT GAHHLMLSPV PEWIQTVAIA FSIFLIAPSW GSVVNGYYTL QGNWEQIRSN
YLVKFFILGI TFYGLQTFQG PTQGLRTLNS FFHFTDWVVG HVHMGTMGWV TLTISASFYY
MIPKISNNQL HSIRIANVHF WLILVGQLIW TVTMWIGGIQ QGAMWKATEP DGSLTYNFLD
ALASLYPYYK LRFAGGVVYF VGIVLFVWNI IMTIRTAKNQ PLNANKEV