| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1560 |
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| Symbol | |
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| ID | 6375238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1683946 |
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| End bp | 1687110 |
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| Gene Length | 3165 bp |
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| Protein Length | 1054 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642684050 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001959964 |
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| Protein GI | 189500494 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.538348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.490234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGA ACACAATTAC CTTTATCAGC GCCGGGGCAG GTTCGGGAAA AACCACCCGG
CTGACTGAGA TCCTTGCAGA GCAGCTTCTT GACAGAGAGG CCGAACCGGA CGGCATCATA
GCCACAACGT TTACCAAAAA GGCAGCGGCT GAACTCAAGG AACGGGTGCG CAGCATGCTT
CTTGAAAAGA ACCGTCAGGA TCTTGCCGTT TCGATTGCCG AAGCGCAGAT CGGGACGGTA
AACAGCGTTT GCGGGGGGCT TTTGAAGCGG TTTGCTTTTG AACTCGGGTT GACTATGGAG
CAAAAAGTGA TTGACGAGCA TGCGGCAATG GAGCGACTCT CAAGGGCGCT TGACGGAGCG
GTTTGCCTTG CTGAACGTCA AGAGATCACG ATCCTTGCAC AACGGCTGGG GTTTGTCGAT
GCAAGGACGG GAAACCTGCA ATGGAAGGAT CATGTGAAAG CGGTTATCGA TCTTGCCCGC
TACAACACCA TCGATGCAGG AAACTTCGAT GAGTTTGCCC GAAAGAATGC GGATGAACTG
CTTGCCCATT TTCCTGAAGC AGTTAATGAC AGGATTGAAG AGGAGGTGCT TTCGGAAATA
ACCTTATTGA AAAAAAAGGT TCAGGAAGAT CTGGCAATCA AGCCGCTTAA AAACACCCGG
CGCTATCTCG ATGCTCTTCT TCATTTCGAG CACTCCCTCG AAACCGCAAC ATTTGCATGG
AAAGAGTGGC TGAAAATGGC AAGGGAAAAA CCACGAAAGG ATCTGCACGA AAAGACTGAA
CGGCTGGACA TGCTTTGCAG GAACGTAGTT TCTCATCCCG GGCTGCACAG GGATATTCGT
GACTACCTTT CGAAGATTTT TTCCGTGGCA TCCCTGACCC TGGGGATCTA TCAGCAGCAG
AAGCAGGAGA TGGGGCTTGT TGACTTCGCC GACCAGGAGT TCCGGTTGCT GGAAGGTCTC
GATAACCCTT TGGTGAGGAG CCATCTTGAA GAAAAACTGC ACCTGTTGCT GGTAGATGAG
TTTCAGGATA CCAGCCCGAT TCAGCTTGCG CTCTTTCTCA AGCTCTCAAG TCTTGCACGG
AGGACATTCT GGGTGGGTGA CATCAAACAG GCGATATACG GTTTTCGCGG GGGAGACGCC
CGGCTTATGC AGGCAGTGCT GAATTTTCTG CCGGACGGCA GCAAGGAAGT TCTCGGCCAG
TCATGGCGAT CGGTGCCGTC ACTTGTTTGC GCGGTCAATG CTGTTTTCTG TCGTTCTTTC
GGGGAGACTC TCGCACGAGA GAATATTGAG CTCATGCCTG AACGTCAGGA ACATTCTTCA
CAGGGTTCCT GCTTTCGGTG GGATCTTGGA GCCGGTGGGC TGGAGCAGCA GTACGAGGCT
CTTGCGGCAG GAGTTCAGCG GCTGGTCGAT GAGGGTTTCG AGGTGTTCGA GAAAAAGGAA
GAAGTATGGC GCAAGGTGCG TTTCGGTGAT ATTGCCATAC TTTCCCGAAC CAATGCGCAT
GTGCAGAAGA TAGCTGCAAT CCTGAAGCAG AACGGCATAC CGGCGGCTAC CGCACAGCCC
GGTTTGCTTG GCTCGCCTGA AGGCCTGTTC CTTACAGCCG GGCTTCGCCG TCTGATCGAT
CCTTCAGATA CGTTGGCCAC AGCTGAACTC TATTCACTGG CAACTTGCAG CGAGCCCGAA
GTATGGTTGC AGAACAGGCT GGACGATCTG GAGTCAGGCA ACGACCCCGA CCGGTGGCTT
GAAGAGGGGA AGAATGCTCA TCCCGTCTTG CGGGAGATTG CCCTGCTGCG GGACCGTTCC
CTCGTGCTTT CGCCGTTTGA TGTGGTTAAG GCGCTGGTCA GCGCCACCGG TGCGGCACGT
TACCTGCTTG CATGGTGTCG TGATGTGGAC ATGGCGAGAA TGCGTCTGTC GAACATGCAA
TCGCTGCTGC AGCTTGCCGG AGAATATGAG GAAGAGTGCG ATACAAAGGG GGGTACAGCG
ACACTCCAGG GGTTGGTTCA CTGGTATGAG CAGCTTGCGG CAGAGGAAAA CGATCTCTTT
CCCGAGCCAC CTGTCAATGC TGTCAGGGTG CTGACCTATC ATACATCCAA GGGGCTCGAA
TGGCCGGTTG TCGTGCTGCT CGATCTTGAT AAGCCGGGCA ATGCAGACCT CTGTTCTCCT
GTGATCGACA GCCCTCAGGA TGTTGACGCC GGTGCTCCCC TGAAAGACCG GTTTATCCGT
TTCTGGCCAT CGCCTTTCGT TAAGAGCGAA CCGTTTCCCG GTCTTGAATC TGTCATACAG
AGCAGGGAAG CGCGACAGGC TGCGGAACTG TCGAGGGATG AGTCGGCAAG GCTGCTCTAC
GTGGCCATGA CCCGCGCGAG GGATTGCCTT GTGCTGGGCA CGTCATCGAA AAGCAAGTCA
TTTCCCTGGT TGGAACAGGC TGGTGCTGCA TGCTTCGTCA CTGATGAAGA TGACGGTATT
GTGCTGCCCG ACGGAAGCCG ACTGCCCTGT AAACGCTGGG AAAATCTCAA TGAGAGCACG
TTGTTGAACC CGGCCGGAAA AGAGCGAACA CCGCTCTTCT GGTACGCTCC GGTGGAGCCT
CCATCAGAAC GTCTGCCGGA ACAGGTGGTC CCGTCGCTGC TGAGAGCGGA AACGGAAGCC
ACGGCAGTCG AATCGATCGT ATACAGCGGC ACGATGAATC TGCATGGCAA CATGGAAGCA
ACTGAAAAAG GTACTGTTGT TCATGATATT CTTGCCTTCG CCCTGACGCA GGAGCCGGAT
GTCTGCGATG CAGCTTCGGT GGCAACGCTG CTCGAAGGAT ACGGCGCGGC TGCTTTGTGC
GAACCTGAAT CCCTTGTCCG CCAGCTCGGA GAATTTCGCC GGATGCTTTC GGAACGCTGG
CCGGACTGCA TGTTTCATAT CGAAGCTCCG GTTGAGCAGC TGTTGCCTGT GGAACAGGTT
CTCAAAGGAC AGATCGACCT GCTGCTGGAG ACGCGACGGG GCTGGGTGAT TATCGATCAT
AAAATCACGA CGATTGAACG GTGTCAGTGG GAACAAAAAG CCATTGAATA CAGCGGGCAG
CTTTTTGCAT ACAAGCAGGC TCTGGAAATG GTTACCGGTA AACCGGTAGA AAGCTGCTGG
ATTCACTTCT TTGCAGCCGG CGGACTTGTC GGTCTGGATG TGTAA
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| Protein sequence | MNTNTITFIS AGAGSGKTTR LTEILAEQLL DREAEPDGII ATTFTKKAAA ELKERVRSML
LEKNRQDLAV SIAEAQIGTV NSVCGGLLKR FAFELGLTME QKVIDEHAAM ERLSRALDGA
VCLAERQEIT ILAQRLGFVD ARTGNLQWKD HVKAVIDLAR YNTIDAGNFD EFARKNADEL
LAHFPEAVND RIEEEVLSEI TLLKKKVQED LAIKPLKNTR RYLDALLHFE HSLETATFAW
KEWLKMAREK PRKDLHEKTE RLDMLCRNVV SHPGLHRDIR DYLSKIFSVA SLTLGIYQQQ
KQEMGLVDFA DQEFRLLEGL DNPLVRSHLE EKLHLLLVDE FQDTSPIQLA LFLKLSSLAR
RTFWVGDIKQ AIYGFRGGDA RLMQAVLNFL PDGSKEVLGQ SWRSVPSLVC AVNAVFCRSF
GETLARENIE LMPERQEHSS QGSCFRWDLG AGGLEQQYEA LAAGVQRLVD EGFEVFEKKE
EVWRKVRFGD IAILSRTNAH VQKIAAILKQ NGIPAATAQP GLLGSPEGLF LTAGLRRLID
PSDTLATAEL YSLATCSEPE VWLQNRLDDL ESGNDPDRWL EEGKNAHPVL REIALLRDRS
LVLSPFDVVK ALVSATGAAR YLLAWCRDVD MARMRLSNMQ SLLQLAGEYE EECDTKGGTA
TLQGLVHWYE QLAAEENDLF PEPPVNAVRV LTYHTSKGLE WPVVVLLDLD KPGNADLCSP
VIDSPQDVDA GAPLKDRFIR FWPSPFVKSE PFPGLESVIQ SREARQAAEL SRDESARLLY
VAMTRARDCL VLGTSSKSKS FPWLEQAGAA CFVTDEDDGI VLPDGSRLPC KRWENLNEST
LLNPAGKERT PLFWYAPVEP PSERLPEQVV PSLLRAETEA TAVESIVYSG TMNLHGNMEA
TEKGTVVHDI LAFALTQEPD VCDAASVATL LEGYGAAALC EPESLVRQLG EFRRMLSERW
PDCMFHIEAP VEQLLPVEQV LKGQIDLLLE TRRGWVIIDH KITTIERCQW EQKAIEYSGQ
LFAYKQALEM VTGKPVESCW IHFFAAGGLV GLDV
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