Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1437 |
Symbol | |
ID | 6375115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1560169 |
End bp | 1560828 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642683931 |
Product | protein of unknown function UPF0005 |
Protein accession | YP_001959845 |
Protein GI | 189500375 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGACCA GGGTCATCAA TCAGGTCTAT ACCTGGATGG CACTCGGGCT TGCGTTGACC GCAACGGTAG GCTTCTATAC CGCTGAAAGT CAGATGCTGA GAAACTTGAT ATTTTCCAAC GGCTTTGTCC TGATCGGCCT GGTAGTGGCT CAGCTGGGAA TCGTGTTAGC GCTGAGCGCA GGTATCAACC GTTTATCCGG TTCGGCTGCA ACAGGCCTGT TTATACTCTA CTCGGGGCTG ACCGGGCTGA CCCTCTCGGC TGTTTTTCTG GTATATACCT ACTCGTCGAT TGCAAGCACT TTTTTTATTA CTTCCGGGAC ATTTGCTGCC ATGAGCGTTT TTGGCCACAC AACAAAACGT GATCTGACAA AGATCGGTAG CATAGCGTTT ATGGCACTTA TTGGTATTAT TCTTGCTTCA GTGGTCAACA TGTTCATGCA GAATTCAATG CTTGAGCTCG GCATCAGTGT TATAGGCGTT CTTCTGTTTA CCGCCTTGAC GGCTTATGAT GCCCAGCGAA TAAAGGAGAT GGCCGCGATG GTGACTGATG GCGAGTCTGA AGCCAAGGTT TCTGTCATGG GGGCTCTTTC GCTGTACCTG AATTTTATCA ACCTCTTCCT GATGCTGCTC CGTTTTCTCG GGGTTGCGCG TGATGAATAA
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Protein sequence | MQTRVINQVY TWMALGLALT ATVGFYTAES QMLRNLIFSN GFVLIGLVVA QLGIVLALSA GINRLSGSAA TGLFILYSGL TGLTLSAVFL VYTYSSIAST FFITSGTFAA MSVFGHTTKR DLTKIGSIAF MALIGIILAS VVNMFMQNSM LELGISVIGV LLFTALTAYD AQRIKEMAAM VTDGESEAKV SVMGALSLYL NFINLFLMLL RFLGVARDE
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