Gene Cphamn1_1437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1437 
Symbol 
ID6375115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1560169 
End bp1560828 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content49% 
IMG OID642683931 
Productprotein of unknown function UPF0005 
Protein accessionYP_001959845 
Protein GI189500375 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGACCA GGGTCATCAA TCAGGTCTAT ACCTGGATGG CACTCGGGCT TGCGTTGACC 
GCAACGGTAG GCTTCTATAC CGCTGAAAGT CAGATGCTGA GAAACTTGAT ATTTTCCAAC
GGCTTTGTCC TGATCGGCCT GGTAGTGGCT CAGCTGGGAA TCGTGTTAGC GCTGAGCGCA
GGTATCAACC GTTTATCCGG TTCGGCTGCA ACAGGCCTGT TTATACTCTA CTCGGGGCTG
ACCGGGCTGA CCCTCTCGGC TGTTTTTCTG GTATATACCT ACTCGTCGAT TGCAAGCACT
TTTTTTATTA CTTCCGGGAC ATTTGCTGCC ATGAGCGTTT TTGGCCACAC AACAAAACGT
GATCTGACAA AGATCGGTAG CATAGCGTTT ATGGCACTTA TTGGTATTAT TCTTGCTTCA
GTGGTCAACA TGTTCATGCA GAATTCAATG CTTGAGCTCG GCATCAGTGT TATAGGCGTT
CTTCTGTTTA CCGCCTTGAC GGCTTATGAT GCCCAGCGAA TAAAGGAGAT GGCCGCGATG
GTGACTGATG GCGAGTCTGA AGCCAAGGTT TCTGTCATGG GGGCTCTTTC GCTGTACCTG
AATTTTATCA ACCTCTTCCT GATGCTGCTC CGTTTTCTCG GGGTTGCGCG TGATGAATAA
 
Protein sequence
MQTRVINQVY TWMALGLALT ATVGFYTAES QMLRNLIFSN GFVLIGLVVA QLGIVLALSA 
GINRLSGSAA TGLFILYSGL TGLTLSAVFL VYTYSSIAST FFITSGTFAA MSVFGHTTKR
DLTKIGSIAF MALIGIILAS VVNMFMQNSM LELGISVIGV LLFTALTAYD AQRIKEMAAM
VTDGESEAKV SVMGALSLYL NFINLFLMLL RFLGVARDE